Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 AL357520.1-201ENST00000441557 453 ntBASIC3.8□□□□□ -1.8
LHX2P50458 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.8□□□□□ -1.8
LHX2P50458 AC114755.5-201ENST00000447760 831 ntBASIC3.8□□□□□ -1.8
LHX2P50458 ABCF2P2-201ENST00000450549 296 ntBASIC3.8□□□□□ -1.8
LHX2P50458 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.8□□□□□ -1.8
LHX2P50458 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.8□□□□□ -1.8
LHX2P50458 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.8□□□□□ -1.8
LHX2P50458 AL513343.1-201ENST00000451818 792 ntBASIC3.8□□□□□ -1.8
LHX2P50458 TPRKBP1-201ENST00000456243 481 ntBASIC3.8□□□□□ -1.8
LHX2P50458 RN7SL41P-201ENST00000476144 297 ntBASIC3.8□□□□□ -1.8
LHX2P50458 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.8□□□□□ -1.8
LHX2P50458 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.8□□□□□ -1.8
LHX2P50458 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.8□□□□□ -1.8
LHX2P50458 PGBD4P4-201ENST00000509673 613 ntBASIC3.8□□□□□ -1.8
LHX2P50458 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.8□□□□□ -1.8
LHX2P50458 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
LHX2P50458 MTCO1P35-201ENST00000515270 228 ntBASIC3.8□□□□□ -1.8
LHX2P50458 RN7SKP21-201ENST00000516503 220 ntBASIC3.8□□□□□ -1.8
LHX2P50458 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.8□□□□□ -1.8
LHX2P50458 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.8□□□□□ -1.8
LHX2P50458 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.8□□□□□ -1.8
LHX2P50458 AC105233.3-201ENST00000531125 744 ntBASIC3.8□□□□□ -1.8
LHX2P50458 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.8□□□□□ -1.8
LHX2P50458 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.8□□□□□ -1.8
LHX2P50458 SULT1C2P2-201ENST00000562517 294 ntBASIC3.8□□□□□ -1.8
LHX2P50458 RN7SL600P-201ENST00000581811 299 ntBASIC3.8□□□□□ -1.8
LHX2P50458 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.8□□□□□ -1.8
LHX2P50458 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.8□□□□□ -1.8
LHX2P50458 AL591034.3-201ENST00000605511 685 ntBASIC3.8□□□□□ -1.8
LHX2P50458 AC073111.2-201ENST00000605657 1075 ntBASIC3.8□□□□□ -1.8
LHX2P50458 AC015802.5-201ENST00000607478 399 ntBASIC3.8□□□□□ -1.8
LHX2P50458 AL592494.3-201ENST00000609485 464 ntBASIC3.8□□□□□ -1.8
LHX2P50458 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.8□□□□□ -1.8
LHX2P50458 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.8□□□□□ -1.8
LHX2P50458 AC003001.2-201ENST00000616294 831 ntBASIC3.8□□□□□ -1.8
LHX2P50458 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.8□□□□□ -1.8
LHX2P50458 AC068724.3-201ENST00000625906 87 ntBASIC3.8□□□□□ -1.8
LHX2P50458 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LHX2P50458 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.8□□□□□ -1.8
LHX2P50458 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.8□□□□□ -1.8
LHX2P50458 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LHX2P50458 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LHX2P50458 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LHX2P50458 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
LHX2P50458 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LHX2P50458 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.8□□□□□ -1.8
LHX2P50458 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
LHX2P50458 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
LHX2P50458 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.79□□□□□ -1.8
LHX2P50458 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LHX2P50458 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LHX2P50458 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
LHX2P50458 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
LHX2P50458 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.79□□□□□ -1.8
LHX2P50458 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LHX2P50458 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.79□□□□□ -1.8
LHX2P50458 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LHX2P50458 RNA5SP317-201ENST00000410176 116 ntBASIC3.79□□□□□ -1.8
LHX2P50458 RN7SKP33-201ENST00000410942 340 ntBASIC3.79□□□□□ -1.8
LHX2P50458 RNA5SP311-201ENST00000411290 116 ntBASIC3.79□□□□□ -1.8
LHX2P50458 EIF4A1P3-201ENST00000411521 244 ntBASIC3.79□□□□□ -1.8
LHX2P50458 AL590806.1-201ENST00000415818 853 ntBASIC3.79□□□□□ -1.8
LHX2P50458 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.79□□□□□ -1.8
LHX2P50458 AL161631.1-201ENST00000417933 486 ntBASIC3.79□□□□□ -1.8
LHX2P50458 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.79□□□□□ -1.8
LHX2P50458 RPS12P5-201ENST00000423449 371 ntBASIC3.79□□□□□ -1.8
LHX2P50458 AL590623.1-201ENST00000427864 105 ntBASIC3.79□□□□□ -1.8
LHX2P50458 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.79□□□□□ -1.8
LHX2P50458 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.79□□□□□ -1.8
LHX2P50458 RPS7P7-201ENST00000463499 571 ntBASIC3.79□□□□□ -1.8
LHX2P50458 AC010469.1-201ENST00000463864 576 ntBASIC3.79□□□□□ -1.8
LHX2P50458 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.79□□□□□ -1.8
LHX2P50458 RPS29P19-201ENST00000479709 171 ntBASIC3.79□□□□□ -1.8
LHX2P50458 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.79□□□□□ -1.8
LHX2P50458 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.79□□□□□ -1.8
LHX2P50458 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.79□□□□□ -1.8
LHX2P50458 RNA5SP315-201ENST00000516340 116 ntBASIC3.79□□□□□ -1.8
LHX2P50458 RNA5SP312-201ENST00000517068 116 ntBASIC3.79□□□□□ -1.8
LHX2P50458 PHBP17-201ENST00000528576 541 ntBASIC3.79□□□□□ -1.8
LHX2P50458 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.79□□□□□ -1.8
LHX2P50458 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.79□□□□□ -1.8
LHX2P50458 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.79□□□□□ -1.8
LHX2P50458 SNRPGP1-201ENST00000553864 222 ntBASIC3.79□□□□□ -1.8
LHX2P50458 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.79□□□□□ -1.8
LHX2P50458 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.79□□□□□ -1.8
LHX2P50458 AC007224.1-201ENST00000564410 144 ntBASIC3.79□□□□□ -1.8
LHX2P50458 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.79□□□□□ -1.8
LHX2P50458 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.79□□□□□ -1.8
LHX2P50458 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.79□□□□□ -1.8
LHX2P50458 AC012213.4-201ENST00000606457 354 ntBASIC3.79□□□□□ -1.8
LHX2P50458 AC012557.1-201ENST00000607115 611 ntBASIC3.79□□□□□ -1.8
LHX2P50458 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.79□□□□□ -1.8
LHX2P50458 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
LHX2P50458 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LHX2P50458 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LHX2P50458 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LHX2P50458 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
LHX2P50458 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LHX2P50458 MTND4P26-201ENST00000415971 1359 ntBASIC3.78□□□□□ -1.8
LHX2P50458 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms