Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HNF4AP41235 AP001880.2-201ENST00000538233 448 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.59□□□□□ -1.67
HNF4AP41235 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.59□□□□□ -1.67
HNF4AP41235 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.59□□□□□ -1.67
HNF4AP41235 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.59□□□□□ -1.67
HNF4AP41235 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.59□□□□□ -1.67
HNF4AP41235 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.59□□□□□ -1.67
HNF4AP41235 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.59□□□□□ -1.67
HNF4AP41235 AL671309.1-201ENST00000603750 544 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 AC087283.1-201ENST00000604029 1074 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 AC011458.1-201ENST00000604034 617 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 OR2BH1P-201ENST00000608850 864 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HNF4AP41235 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.59□□□□□ -1.67
HNF4AP41235 AC023509.5-201ENST00000617434 807 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.59□□□□□ -1.67
HNF4AP41235 AP006248.3-201ENST00000623580 594 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
HNF4AP41235 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.59□□□□□ -1.68
HNF4AP41235 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HNF4AP41235 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HNF4AP41235 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HNF4AP41235 ERCC6-202ENST00000374127 1782 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.58□□□□□ -1.68
HNF4AP41235 AC119744.1-201ENST00000454746 1715 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HNF4AP41235 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
HNF4AP41235 AP000568.1-201ENST00000282964 442 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HNF4AP41235 IL6STP1-201ENST00000346911 1020 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 RN7SKP149-201ENST00000363008 344 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HNF4AP41235 AL590762.2-201ENST00000395798 571 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 AL080315.1-201ENST00000406055 466 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.58□□□□□ -1.68
HNF4AP41235 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.58□□□□□ -1.68
HNF4AP41235 AC004074.1-201ENST00000421810 1063 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 RPL7P57-201ENST00000423238 740 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 RPS12P5-201ENST00000423449 371 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.58□□□□□ -1.68
HNF4AP41235 AC008072.1-201ENST00000434254 824 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.58□□□□□ -1.68
HNF4AP41235 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.58□□□□□ -1.68
HNF4AP41235 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HNF4AP41235 AC068135.1-201ENST00000446164 246 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.58□□□□□ -1.68
HNF4AP41235 AC091685.2-201ENST00000454924 864 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.58□□□□□ -1.68
HNF4AP41235 MTND2P30-201ENST00000456663 382 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 AC092905.1-201ENST00000467527 949 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 AC018635.1-201ENST00000468292 1030 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 AC104689.1-201ENST00000473356 768 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.58□□□□□ -1.68
HNF4AP41235 AC083982.1-201ENST00000485679 344 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 AC025164.1-201ENST00000496249 478 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.58□□□□□ -1.68
HNF4AP41235 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.58□□□□□ -1.68
HNF4AP41235 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HNF4AP41235 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.58□□□□□ -1.68
HNF4AP41235 AC090071.1-201ENST00000507713 644 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.58□□□□□ -1.68
HNF4AP41235 AC008494.2-201ENST00000514544 370 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 SNORA76.2-201ENST00000517095 137 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 HMGB1P23-201ENST00000518743 568 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.58□□□□□ -1.68
HNF4AP41235 AC079075.1-201ENST00000559543 878 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.58□□□□□ -1.68
HNF4AP41235 AC027104.1-201ENST00000563702 681 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 AC027455.1-201ENST00000574104 594 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 RN7SL176P-201ENST00000580352 264 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 AC007448.1-201ENST00000582714 234 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 AC125494.3-201ENST00000602759 455 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 AC005776.1-201ENST00000603164 290 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 AC083899.3-201ENST00000603413 594 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 AC005034.4-201ENST00000603612 899 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 AC079880.2-201ENST00000603790 1213 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 AC024940.4-201ENST00000605507 246 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 AC105429.2-201ENST00000610567 517 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.58□□□□□ -1.68
HNF4AP41235 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.58□□□□□ -1.68
HNF4AP41235 AC097372.4-201ENST00000625025 466 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
HNF4AP41235 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
HNF4AP41235 PNPT1P2-201ENST00000456768 2050 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 ZNF33CP-201ENST00000432492 2030 ntBASIC4.58□□□□□ -1.68
HNF4AP41235 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HNF4AP41235 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
HNF4AP41235 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
HNF4AP41235 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
HNF4AP41235 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HNF4AP41235 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HNF4AP41235 AL133412.1-201ENST00000380194 2992 ntBASIC4.57□□□□□ -1.68
HNF4AP41235 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HNF4AP41235 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HNF4AP41235 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.57□□□□□ -1.68
HNF4AP41235 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HNF4AP41235 RN7SKP103-201ENST00000363848 320 ntBASIC4.57□□□□□ -1.68
HNF4AP41235 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms