Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 SNORD46.1-201ENST00000364139 104 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 RNA5SP283-201ENST00000365604 119 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
POLR2AP24928 TRAV35-201ENST00000390462 330 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 MTND4LP20-201ENST00000402379 270 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.47□□□□□ -1.53
POLR2AP24928 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.47□□□□□ -1.53
POLR2AP24928 RPL23AP26-201ENST00000412728 464 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 AC009237.10-201ENST00000414112 510 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 AC234781.2-201ENST00000426370 994 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 AL451062.2-201ENST00000427515 271 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 AL035407.1-201ENST00000429211 571 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 MTCYBP29-201ENST00000436327 1006 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.47□□□□□ -1.53
POLR2AP24928 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.47□□□□□ -1.53
POLR2AP24928 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.47□□□□□ -1.53
POLR2AP24928 AC008280.2-201ENST00000455473 307 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 USP9YP25-201ENST00000457708 443 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
POLR2AP24928 PGBD4P4-201ENST00000509673 613 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.47□□□□□ -1.53
POLR2AP24928 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.47□□□□□ -1.53
POLR2AP24928 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.47□□□□□ -1.53
POLR2AP24928 AC138938.1-201ENST00000515431 782 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 RNU6-1129P-201ENST00000515964 104 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 ZDHHC20P3-201ENST00000531576 336 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
POLR2AP24928 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
POLR2AP24928 DPPA3P2-201ENST00000553589 478 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.47□□□□□ -1.53
POLR2AP24928 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.47□□□□□ -1.53
POLR2AP24928 RN7SL703P-201ENST00000578485 302 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.47□□□□□ -1.53
POLR2AP24928 AP003465.2-201ENST00000602571 373 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 AP002906.1-201ENST00000603405 233 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 MTND3P19-201ENST00000603825 345 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 DPRXP5-201ENST00000604662 539 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 AC000095.2-202ENST00000637415 154 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
POLR2AP24928 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.47□□□□□ -1.53
POLR2AP24928 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
POLR2AP24928 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
POLR2AP24928 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
POLR2AP24928 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
POLR2AP24928 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
POLR2AP24928 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
POLR2AP24928 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
POLR2AP24928 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
POLR2AP24928 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
POLR2AP24928 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.47□□□□□ -1.53
POLR2AP24928 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
POLR2AP24928 AL136310.1-201ENST00000404926 654 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.47□□□□□ -1.53
POLR2AP24928 AL356320.2-201ENST00000417263 507 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 RPL30P16-201ENST00000419341 429 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
POLR2AP24928 OSTCP5-201ENST00000425293 453 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.47□□□□□ -1.53
POLR2AP24928 AC084290.1-201ENST00000434995 374 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 FABP5P3-201ENST00000437960 408 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.47□□□□□ -1.53
POLR2AP24928 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.47□□□□□ -1.53
POLR2AP24928 RN7SKP34-201ENST00000516142 244 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 RN7SKP5-201ENST00000517045 272 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
POLR2AP24928 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.47□□□□□ -1.53
POLR2AP24928 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.47□□□□□ -1.53
POLR2AP24928 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
POLR2AP24928 AC008015.1-201ENST00000555505 465 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 AC090695.1-201ENST00000561269 1222 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 MIR4801-201ENST00000582704 82 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.47□□□□□ -1.53
POLR2AP24928 AC004987.4-201ENST00000603383 338 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 AC018695.5-201ENST00000605872 315 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 AL360219.1-201ENST00000610230 366 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.47□□□□□ -1.53
POLR2AP24928 WT1-AS_8.1-201ENST00000615200 275 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 AC079248.2-201ENST00000623779 326 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 AC073530.2-201ENST00000623987 261 ntBASIC5.47□□□□□ -1.53
POLR2AP24928 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.47□□□□□ -1.53
POLR2AP24928 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.47□□□□□ -1.53
POLR2AP24928 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.47□□□□□ -1.53
POLR2AP24928 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
POLR2AP24928 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.46□□□□□ -1.53
POLR2AP24928 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.46□□□□□ -1.53
POLR2AP24928 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC5.46□□□□□ -1.53
POLR2AP24928 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
POLR2AP24928 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
POLR2AP24928 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
POLR2AP24928 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
POLR2AP24928 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
POLR2AP24928 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
POLR2AP24928 SPRR2C-201ENST00000290702 219 ntBASIC5.46□□□□□ -1.54
POLR2AP24928 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
POLR2AP24928 SNORA11F-201ENST00000408237 128 ntBASIC5.46□□□□□ -1.54
POLR2AP24928 RN7SKP17-201ENST00000411242 351 ntBASIC5.46□□□□□ -1.54
POLR2AP24928 EIF4A1P3-201ENST00000411521 244 ntBASIC5.46□□□□□ -1.54
POLR2AP24928 E2F6P2-201ENST00000420708 748 ntBASIC5.46□□□□□ -1.54
POLR2AP24928 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms