Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC6.63□□□□□ -1.35
LIG1P18858 AC046134.1-201ENST00000514454 666 ntBASIC6.63□□□□□ -1.35
LIG1P18858 RNA5SP438-201ENST00000516561 112 ntBASIC6.63□□□□□ -1.35
LIG1P18858 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.63□□□□□ -1.35
LIG1P18858 TRIM77BP-201ENST00000524985 1119 ntBASIC6.63□□□□□ -1.35
LIG1P18858 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC6.63□□□□□ -1.35
LIG1P18858 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.63□□□□□ -1.35
LIG1P18858 CR383658.2-201ENST00000547576 1525 ntBASIC6.63□□□□□ -1.35
LIG1P18858 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.63□□□□□ -1.35
LIG1P18858 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.63□□□□□ -1.35
LIG1P18858 ANP32BP3-201ENST00000559213 706 ntBASIC6.63□□□□□ -1.35
LIG1P18858 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC6.63□□□□□ -1.35
LIG1P18858 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC6.63□□□□□ -1.35
LIG1P18858 PCMTD1P2-201ENST00000565017 355 ntBASIC6.63□□□□□ -1.35
LIG1P18858 AC009962.1-201ENST00000567327 3813 ntBASIC6.63□□□□□ -1.35
LIG1P18858 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LIG1P18858 AC006504.3-201ENST00000586818 523 ntBASIC6.63□□□□□ -1.35
LIG1P18858 AC133552.5-201ENST00000604266 540 ntBASIC6.63□□□□□ -1.35
LIG1P18858 AC104458.1-201ENST00000608243 463 ntBASIC6.63□□□□□ -1.35
LIG1P18858 AC024560.3-201ENST00000608482 349 ntBASIC6.63□□□□□ -1.35
LIG1P18858 AC007497.1-201ENST00000610421 561 ntBASIC6.63□□□□□ -1.35
LIG1P18858 AC009704.2-201ENST00000618739 483 ntBASIC6.63□□□□□ -1.35
LIG1P18858 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.63□□□□□ -1.35
LIG1P18858 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.63□□□□□ -1.35
LIG1P18858 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
LIG1P18858 PARP4P2-201ENST00000446672 3326 ntBASIC6.63□□□□□ -1.35
LIG1P18858 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LIG1P18858 GNL2P1-201ENST00000451274 2190 ntBASIC6.62□□□□□ -1.35
LIG1P18858 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LIG1P18858 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
LIG1P18858 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
LIG1P18858 MTND5P17-201ENST00000418405 1603 ntBASIC6.62□□□□□ -1.35
LIG1P18858 AC091305.2-201ENST00000624049 1576 ntBASIC6.62□□□□□ -1.35
LIG1P18858 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
LIG1P18858 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
LIG1P18858 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LIG1P18858 AC135352.1-201ENST00000506173 1418 ntBASIC6.62□□□□□ -1.35
LIG1P18858 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LIG1P18858 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LIG1P18858 RPS4XP5-202ENST00000449995 1334 ntBASIC6.62□□□□□ -1.35
LIG1P18858 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
LIG1P18858 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LIG1P18858 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.62□□□□□ -1.35
LIG1P18858 RNA5SP273-201ENST00000362484 113 ntBASIC6.62□□□□□ -1.35
LIG1P18858 RNA5SP477-201ENST00000362639 119 ntBASIC6.62□□□□□ -1.35
LIG1P18858 RNU6-374P-201ENST00000364146 108 ntBASIC6.62□□□□□ -1.35
LIG1P18858 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LIG1P18858 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LIG1P18858 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.62□□□□□ -1.35
LIG1P18858 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.62□□□□□ -1.35
LIG1P18858 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.62□□□□□ -1.35
LIG1P18858 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.62□□□□□ -1.35
LIG1P18858 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.62□□□□□ -1.35
LIG1P18858 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.62□□□□□ -1.35
LIG1P18858 RPS3P2-201ENST00000421346 701 ntBASIC6.62□□□□□ -1.35
LIG1P18858 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC6.62□□□□□ -1.35
LIG1P18858 BLOC1S2P1-201ENST00000428431 301 ntBASIC6.62□□□□□ -1.35
LIG1P18858 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.62□□□□□ -1.35
LIG1P18858 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.62□□□□□ -1.35
LIG1P18858 AC093716.1-201ENST00000435923 377 ntBASIC6.62□□□□□ -1.35
LIG1P18858 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC6.62□□□□□ -1.35
LIG1P18858 ARL5AP2-201ENST00000444698 533 ntBASIC6.62□□□□□ -1.35
LIG1P18858 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC6.62□□□□□ -1.35
LIG1P18858 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.62□□□□□ -1.35
LIG1P18858 UBDP1-202ENST00000457888 382 ntBASIC6.62□□□□□ -1.35
LIG1P18858 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.62□□□□□ -1.35
LIG1P18858 AC146507.1-201ENST00000468335 354 ntBASIC6.62□□□□□ -1.35
LIG1P18858 MTND6P6-201ENST00000478031 263 ntBASIC6.62□□□□□ -1.35
LIG1P18858 AC073522.1-201ENST00000483312 377 ntBASIC6.62□□□□□ -1.35
LIG1P18858 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.62□□□□□ -1.35
LIG1P18858 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.62□□□□□ -1.35
LIG1P18858 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC6.62□□□□□ -1.35
LIG1P18858 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.62□□□□□ -1.35
LIG1P18858 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC6.62□□□□□ -1.35
LIG1P18858 Y_RNA.667-201ENST00000516212 107 ntBASIC6.62□□□□□ -1.35
LIG1P18858 RN7SKP31-201ENST00000516354 278 ntBASIC6.62□□□□□ -1.35
LIG1P18858 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LIG1P18858 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.62□□□□□ -1.35
LIG1P18858 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.62□□□□□ -1.35
LIG1P18858 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC6.62□□□□□ -1.35
LIG1P18858 CR383656.6-201ENST00000550518 394 ntBASIC6.62□□□□□ -1.35
LIG1P18858 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.62□□□□□ -1.35
LIG1P18858 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.62□□□□□ -1.35
LIG1P18858 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LIG1P18858 FAM106CP-201ENST00000582212 507 ntBASIC6.62□□□□□ -1.35
LIG1P18858 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.62□□□□□ -1.35
LIG1P18858 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.62□□□□□ -1.35
LIG1P18858 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LIG1P18858 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.62□□□□□ -1.35
LIG1P18858 AC078795.3-201ENST00000602913 472 ntBASIC6.62□□□□□ -1.35
LIG1P18858 AC005034.5-201ENST00000604219 466 ntBASIC6.62□□□□□ -1.35
LIG1P18858 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.62□□□□□ -1.35
LIG1P18858 AL096712.1-201ENST00000614561 159 ntBASIC6.62□□□□□ -1.35
LIG1P18858 AC104260.1-201ENST00000616660 539 ntBASIC6.62□□□□□ -1.35
LIG1P18858 AC024884.1-201ENST00000620583 399 ntBASIC6.62□□□□□ -1.35
LIG1P18858 AP005264.7-201ENST00000625003 745 ntBASIC6.62□□□□□ -1.35
LIG1P18858 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.62□□□□□ -1.35
LIG1P18858 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.62□□□□□ -1.35
LIG1P18858 MIR3688-2-201ENST00000636963 87 ntBASIC6.62□□□□□ -1.35
LIG1P18858 LRRC77P-213ENST00000637727 880 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms