Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.03□□□□□ -1.76
NCK1P16333 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.03□□□□□ -1.76
NCK1P16333 VTA1P2-201ENST00000520205 911 ntBASIC4.03□□□□□ -1.76
NCK1P16333 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.03□□□□□ -1.76
NCK1P16333 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.03□□□□□ -1.76
NCK1P16333 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.03□□□□□ -1.76
NCK1P16333 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.03□□□□□ -1.76
NCK1P16333 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.03□□□□□ -1.76
NCK1P16333 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.03□□□□□ -1.76
NCK1P16333 AL354984.3-201ENST00000604803 325 ntBASIC4.03□□□□□ -1.76
NCK1P16333 BX322635.1-201ENST00000605804 496 ntBASIC4.03□□□□□ -1.76
NCK1P16333 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.03□□□□□ -1.76
NCK1P16333 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.03□□□□□ -1.76
NCK1P16333 USP9YP4-201ENST00000424401 1745 ntBASIC4.03□□□□□ -1.76
NCK1P16333 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NCK1P16333 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NCK1P16333 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NCK1P16333 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
NCK1P16333 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
NCK1P16333 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
NCK1P16333 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.02□□□□□ -1.77
NCK1P16333 AC125257.1-201ENST00000560400 2930 ntBASIC4.02□□□□□ -1.77
NCK1P16333 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
NCK1P16333 AL353743.4-201ENST00000422653 1547 ntBASIC4.02□□□□□ -1.77
NCK1P16333 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
NCK1P16333 AC008033.1-201ENST00000216407 1162 ntBASIC4.02□□□□□ -1.77
NCK1P16333 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NCK1P16333 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
NCK1P16333 SNORA37-201ENST00000384504 129 ntBASIC4.02□□□□□ -1.77
NCK1P16333 MIR3065-201ENST00000390137 79 ntBASIC4.02□□□□□ -1.77
NCK1P16333 MIR708-201ENST00000390708 88 ntBASIC4.02□□□□□ -1.77
NCK1P16333 AL583835.1-201ENST00000399570 407 ntBASIC4.02□□□□□ -1.77
NCK1P16333 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
NCK1P16333 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.02□□□□□ -1.77
NCK1P16333 AC092647.1-201ENST00000420654 287 ntBASIC4.02□□□□□ -1.77
NCK1P16333 RPS12P5-201ENST00000423449 371 ntBASIC4.02□□□□□ -1.77
NCK1P16333 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.02□□□□□ -1.77
NCK1P16333 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.02□□□□□ -1.77
NCK1P16333 YWHAEP5-201ENST00000431545 765 ntBASIC4.02□□□□□ -1.77
NCK1P16333 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NCK1P16333 TRIM60P13-201ENST00000432350 1283 ntBASIC4.02□□□□□ -1.77
NCK1P16333 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.02□□□□□ -1.77
NCK1P16333 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.02□□□□□ -1.77
NCK1P16333 MTND5P8-201ENST00000449817 1083 ntBASIC4.02□□□□□ -1.77
NCK1P16333 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.02□□□□□ -1.77
NCK1P16333 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.02□□□□□ -1.77
NCK1P16333 OR7H2P-201ENST00000513483 306 ntBASIC4.02□□□□□ -1.77
NCK1P16333 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.02□□□□□ -1.77
NCK1P16333 AC006064.5-201ENST00000541782 248 ntBASIC4.02□□□□□ -1.77
NCK1P16333 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.02□□□□□ -1.77
NCK1P16333 HMGN2P6-201ENST00000551091 273 ntBASIC4.02□□□□□ -1.77
NCK1P16333 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.02□□□□□ -1.77
NCK1P16333 EDDM3DP-201ENST00000554692 434 ntBASIC4.02□□□□□ -1.77
NCK1P16333 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.02□□□□□ -1.77
NCK1P16333 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.02□□□□□ -1.77
NCK1P16333 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.02□□□□□ -1.77
NCK1P16333 AC106785.3-201ENST00000564064 847 ntBASIC4.02□□□□□ -1.77
NCK1P16333 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.02□□□□□ -1.77
NCK1P16333 MTND4LP24-201ENST00000572277 291 ntBASIC4.02□□□□□ -1.77
NCK1P16333 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.02□□□□□ -1.77
NCK1P16333 MIR4443-201ENST00000585052 53 ntBASIC4.02□□□□□ -1.77
NCK1P16333 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.02□□□□□ -1.77
NCK1P16333 AC093765.1-201ENST00000603758 881 ntBASIC4.02□□□□□ -1.77
NCK1P16333 SUMO2P14-201ENST00000604488 293 ntBASIC4.02□□□□□ -1.77
NCK1P16333 AC025175.1-201ENST00000606482 759 ntBASIC4.02□□□□□ -1.77
NCK1P16333 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NCK1P16333 AL133243.1-201ENST00000614487 366 ntBASIC4.02□□□□□ -1.77
NCK1P16333 AC000123.2-201ENST00000623124 461 ntBASIC4.02□□□□□ -1.77
NCK1P16333 AC015726.3-201ENST00000624501 418 ntBASIC4.02□□□□□ -1.77
NCK1P16333 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.02□□□□□ -1.77
NCK1P16333 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NCK1P16333 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NCK1P16333 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
NCK1P16333 DDX6P1-205ENST00000441966 1436 ntBASIC4.02□□□□□ -1.77
NCK1P16333 GTF2H2B-203ENST00000508065 1432 ntBASIC4.02□□□□□ -1.77
NCK1P16333 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
NCK1P16333 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NCK1P16333 AC022031.1-201ENST00000585985 2593 ntBASIC4.02□□□□□ -1.77
NCK1P16333 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NCK1P16333 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
NCK1P16333 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.02□□□□□ -1.77
NCK1P16333 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.01□□□□□ -1.77
NCK1P16333 AC109780.1-201ENST00000451768 1344 ntBASIC4.01□□□□□ -1.77
NCK1P16333 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.01□□□□□ -1.77
NCK1P16333 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NCK1P16333 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.01□□□□□ -1.77
NCK1P16333 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NCK1P16333 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
NCK1P16333 CCNB2P1-201ENST00000399411 1150 ntBASIC4.01□□□□□ -1.77
NCK1P16333 SNORA11B-201ENST00000408175 129 ntBASIC4.01□□□□□ -1.77
NCK1P16333 RPL23AP27-201ENST00000415161 451 ntBASIC4.01□□□□□ -1.77
NCK1P16333 GTF3AP1-201ENST00000416942 1004 ntBASIC4.01□□□□□ -1.77
NCK1P16333 RPL7AP25-201ENST00000423357 805 ntBASIC4.01□□□□□ -1.77
NCK1P16333 MTND2P11-201ENST00000423638 648 ntBASIC4.01□□□□□ -1.77
NCK1P16333 MTND4LP14-201ENST00000429447 288 ntBASIC4.01□□□□□ -1.77
NCK1P16333 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.01□□□□□ -1.77
NCK1P16333 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.01□□□□□ -1.77
NCK1P16333 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.01□□□□□ -1.77
NCK1P16333 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.01□□□□□ -1.77
NCK1P16333 RPL36AP15-201ENST00000444514 266 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 473.7 ms