Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL11A1P12107 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL11A1P12107 TCEA1P2-201ENST00000420496 906 ntBASIC4.45□□□□□ -1.7
COL11A1P12107 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.45□□□□□ -1.7
COL11A1P12107 RPL7P4-203ENST00000430239 730 ntBASIC4.45□□□□□ -1.7
COL11A1P12107 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.45□□□□□ -1.7
COL11A1P12107 KATNBL1P2-201ENST00000433311 835 ntBASIC4.45□□□□□ -1.7
COL11A1P12107 Z74696.2-201ENST00000436514 498 ntBASIC4.45□□□□□ -1.7
COL11A1P12107 HMGB1P37-201ENST00000439613 609 ntBASIC4.45□□□□□ -1.7
COL11A1P12107 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.45□□□□□ -1.7
COL11A1P12107 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.45□□□□□ -1.7
COL11A1P12107 MTND1P6-201ENST00000523621 946 ntBASIC4.45□□□□□ -1.7
COL11A1P12107 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.45□□□□□ -1.7
COL11A1P12107 AL353600.1-201ENST00000608148 251 ntBASIC4.45□□□□□ -1.7
COL11A1P12107 AC091953.5-201ENST00000622919 233 ntBASIC4.45□□□□□ -1.7
COL11A1P12107 AL034408.1-202ENST00000636088 415 ntBASIC4.45□□□□□ -1.7
COL11A1P12107 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
COL11A1P12107 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL11A1P12107 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
COL11A1P12107 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
COL11A1P12107 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COL11A1P12107 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
COL11A1P12107 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.45□□□□□ -1.7
COL11A1P12107 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC4.44□□□□□ -1.7
COL11A1P12107 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
COL11A1P12107 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.44□□□□□ -1.7
COL11A1P12107 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.44□□□□□ -1.7
COL11A1P12107 CRYBB2P1-203ENST00000415709 538 ntBASIC4.44□□□□□ -1.7
COL11A1P12107 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.44□□□□□ -1.7
COL11A1P12107 AC021146.3-201ENST00000511911 260 ntBASIC4.44□□□□□ -1.7
COL11A1P12107 OR8I1P-201ENST00000529291 931 ntBASIC4.44□□□□□ -1.7
COL11A1P12107 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.44□□□□□ -1.7
COL11A1P12107 HSPE1P5-201ENST00000561489 272 ntBASIC4.44□□□□□ -1.7
COL11A1P12107 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.44□□□□□ -1.7
COL11A1P12107 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.44□□□□□ -1.7
COL11A1P12107 AC005344.1-201ENST00000613391 459 ntBASIC4.44□□□□□ -1.7
COL11A1P12107 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.44□□□□□ -1.7
COL11A1P12107 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL11A1P12107 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.44□□□□□ -1.7
COL11A1P12107 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.44□□□□□ -1.7
COL11A1P12107 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL11A1P12107 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL11A1P12107 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COL11A1P12107 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL11A1P12107 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.44□□□□□ -1.7
COL11A1P12107 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
COL11A1P12107 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
COL11A1P12107 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL11A1P12107 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
COL11A1P12107 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL11A1P12107 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL11A1P12107 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.44□□□□□ -1.7
COL11A1P12107 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.44□□□□□ -1.7
COL11A1P12107 CDH12P2-201ENST00000504393 298 ntBASIC4.44□□□□□ -1.7
COL11A1P12107 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.44□□□□□ -1.7
COL11A1P12107 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.44□□□□□ -1.7
COL11A1P12107 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.44□□□□□ -1.7
COL11A1P12107 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.44□□□□□ -1.7
COL11A1P12107 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.44□□□□□ -1.7
COL11A1P12107 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL11A1P12107 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL11A1P12107 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL11A1P12107 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL11A1P12107 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL11A1P12107 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
COL11A1P12107 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.43□□□□□ -1.7
COL11A1P12107 VDAC2P1-201ENST00000399358 958 ntBASIC4.43□□□□□ -1.7
COL11A1P12107 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL11A1P12107 AC007688.1-201ENST00000475592 759 ntBASIC4.43□□□□□ -1.7
COL11A1P12107 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.43□□□□□ -1.7
COL11A1P12107 AC104619.4-201ENST00000510773 249 ntBASIC4.43□□□□□ -1.7
COL11A1P12107 RN7SKP18-201ENST00000516005 275 ntBASIC4.43□□□□□ -1.7
COL11A1P12107 RNU1-95P-201ENST00000516357 160 ntBASIC4.43□□□□□ -1.7
COL11A1P12107 RNU1-128P-201ENST00000516704 160 ntBASIC4.43□□□□□ -1.7
COL11A1P12107 MIR5187-201ENST00000583479 76 ntBASIC4.43□□□□□ -1.7
COL11A1P12107 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
COL11A1P12107 SRGNP1-201ENST00000603392 451 ntBASIC4.43□□□□□ -1.7
COL11A1P12107 AC024560.2-201ENST00000507981 1497 ntBASIC4.43□□□□□ -1.7
COL11A1P12107 LINC00561-201ENST00000565815 2738 ntBASIC4.43□□□□□ -1.7
COL11A1P12107 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL11A1P12107 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
COL11A1P12107 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
COL11A1P12107 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.42□□□□□ -1.7
COL11A1P12107 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.42□□□□□ -1.7
COL11A1P12107 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL11A1P12107 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.42□□□□□ -1.7
COL11A1P12107 MIR483-201ENST00000385070 76 ntBASIC4.42□□□□□ -1.7
COL11A1P12107 AC245052.5-201ENST00000416320 649 ntBASIC4.42□□□□□ -1.7
COL11A1P12107 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.42□□□□□ -1.7
COL11A1P12107 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC4.42□□□□□ -1.7
COL11A1P12107 UBDP1-202ENST00000457888 382 ntBASIC4.42□□□□□ -1.7
COL11A1P12107 AC093853.1-201ENST00000515689 483 ntBASIC4.42□□□□□ -1.7
COL11A1P12107 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.42□□□□□ -1.7
COL11A1P12107 UBTFL9-201ENST00000534504 1148 ntBASIC4.42□□□□□ -1.7
COL11A1P12107 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.42□□□□□ -1.7
COL11A1P12107 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.42□□□□□ -1.7
COL11A1P12107 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.42□□□□□ -1.7
COL11A1P12107 AP000255.1-201ENST00000610276 676 ntBASIC4.42□□□□□ -1.7
COL11A1P12107 AL391261.4-201ENST00000616012 481 ntBASIC4.42□□□□□ -1.7
COL11A1P12107 AC016957.2-201ENST00000616998 848 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms