Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.95□□□□□ -1.62
TOP1P11387 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
TOP1P11387 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.95□□□□□ -1.62
TOP1P11387 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TOP1P11387 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TOP1P11387 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
TOP1P11387 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
TOP1P11387 AC105074.1-201ENST00000623380 3095 ntBASIC4.94□□□□□ -1.62
TOP1P11387 AC087190.4-201ENST00000574616 8334 ntBASIC4.94□□□□□ -1.62
TOP1P11387 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TOP1P11387 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TOP1P11387 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TOP1P11387 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TOP1P11387 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TOP1P11387 MIR448-201ENST00000362131 111 ntBASIC4.94□□□□□ -1.62
TOP1P11387 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.94□□□□□ -1.62
TOP1P11387 AL034374.1-201ENST00000406329 351 ntBASIC4.94□□□□□ -1.62
TOP1P11387 AL161631.1-201ENST00000417933 486 ntBASIC4.94□□□□□ -1.62
TOP1P11387 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.94□□□□□ -1.62
TOP1P11387 RPS27AP12-201ENST00000429552 465 ntBASIC4.94□□□□□ -1.62
TOP1P11387 UBE2V2P1-201ENST00000434717 398 ntBASIC4.94□□□□□ -1.62
TOP1P11387 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.94□□□□□ -1.62
TOP1P11387 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.94□□□□□ -1.62
TOP1P11387 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.94□□□□□ -1.62
TOP1P11387 RN7SKP21-201ENST00000516503 220 ntBASIC4.94□□□□□ -1.62
TOP1P11387 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.94□□□□□ -1.62
TOP1P11387 AC105233.3-201ENST00000531125 744 ntBASIC4.94□□□□□ -1.62
TOP1P11387 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TOP1P11387 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
TOP1P11387 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.94□□□□□ -1.62
TOP1P11387 AC069240.1-201ENST00000548774 375 ntBASIC4.94□□□□□ -1.62
TOP1P11387 CYP4A43P-201ENST00000568156 121 ntBASIC4.94□□□□□ -1.62
TOP1P11387 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.94□□□□□ -1.62
TOP1P11387 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.94□□□□□ -1.62
TOP1P11387 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.94□□□□□ -1.62
TOP1P11387 AL591034.3-201ENST00000605511 685 ntBASIC4.94□□□□□ -1.62
TOP1P11387 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TOP1P11387 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.94□□□□□ -1.62
TOP1P11387 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.94□□□□□ -1.62
TOP1P11387 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.94□□□□□ -1.62
TOP1P11387 AC090506.2-201ENST00000624521 419 ntBASIC4.94□□□□□ -1.62
TOP1P11387 CYP1D1P-201ENST00000416662 1433 ntBASIC4.94□□□□□ -1.62
TOP1P11387 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
TOP1P11387 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.94□□□□□ -1.62
TOP1P11387 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.93□□□□□ -1.62
TOP1P11387 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TOP1P11387 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.93□□□□□ -1.62
TOP1P11387 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
TOP1P11387 RNU6-146P-201ENST00000384602 108 ntBASIC4.93□□□□□ -1.62
TOP1P11387 AL022722.2-201ENST00000402519 180 ntBASIC4.93□□□□□ -1.62
TOP1P11387 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.93□□□□□ -1.62
TOP1P11387 RN7SKP33-201ENST00000410942 340 ntBASIC4.93□□□□□ -1.62
TOP1P11387 TRIM60P17-201ENST00000415181 719 ntBASIC4.93□□□□□ -1.62
TOP1P11387 AL590806.1-201ENST00000415818 853 ntBASIC4.93□□□□□ -1.62
TOP1P11387 GSTA7P-201ENST00000438425 448 ntBASIC4.93□□□□□ -1.62
TOP1P11387 CACYBPP1-201ENST00000438592 684 ntBASIC4.93□□□□□ -1.62
TOP1P11387 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.93□□□□□ -1.62
TOP1P11387 AC114755.5-201ENST00000447760 831 ntBASIC4.93□□□□□ -1.62
TOP1P11387 CCRL1P1-201ENST00000449542 1053 ntBASIC4.93□□□□□ -1.62
TOP1P11387 RNA5SP246-201ENST00000458909 119 ntBASIC4.93□□□□□ -1.62
TOP1P11387 AC010469.1-201ENST00000463864 576 ntBASIC4.93□□□□□ -1.62
TOP1P11387 RPS29P19-201ENST00000479709 171 ntBASIC4.93□□□□□ -1.62
TOP1P11387 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.93□□□□□ -1.62
TOP1P11387 MTCO1P35-201ENST00000515270 228 ntBASIC4.93□□□□□ -1.62
TOP1P11387 IFITM8P-201ENST00000522529 394 ntBASIC4.93□□□□□ -1.62
TOP1P11387 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.93□□□□□ -1.62
TOP1P11387 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.93□□□□□ -1.62
TOP1P11387 AC007224.1-201ENST00000564410 144 ntBASIC4.93□□□□□ -1.62
TOP1P11387 AC115989.2-201ENST00000578640 563 ntBASIC4.93□□□□□ -1.62
TOP1P11387 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.93□□□□□ -1.62
TOP1P11387 AC090953.1-201ENST00000604305 1092 ntBASIC4.93□□□□□ -1.62
TOP1P11387 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.93□□□□□ -1.62
TOP1P11387 AL158196.1-201ENST00000616786 434 ntBASIC4.93□□□□□ -1.62
TOP1P11387 RMST_5.1-201ENST00000618704 126 ntBASIC4.93□□□□□ -1.62
TOP1P11387 AC068724.3-201ENST00000625906 87 ntBASIC4.93□□□□□ -1.62
TOP1P11387 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.93□□□□□ -1.62
TOP1P11387 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.93□□□□□ -1.62
TOP1P11387 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.93□□□□□ -1.62
TOP1P11387 AC027290.2-201ENST00000623210 18662 ntBASIC4.93□□□□□ -1.62
TOP1P11387 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TOP1P11387 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.93□□□□□ -1.62
TOP1P11387 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TOP1P11387 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TOP1P11387 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TOP1P11387 MFSD8-220ENST00000641243 1422 ntBASIC4.92□□□□□ -1.62
TOP1P11387 OR52B1P-201ENST00000316506 909 ntBASIC4.92□□□□□ -1.62
TOP1P11387 RN7SKP227-201ENST00000364445 330 ntBASIC4.92□□□□□ -1.62
TOP1P11387 LAP3P1-201ENST00000403648 294 ntBASIC4.92□□□□□ -1.62
TOP1P11387 MIR1179-201ENST00000408703 91 ntBASIC4.92□□□□□ -1.62
TOP1P11387 RNA5SP317-201ENST00000410176 116 ntBASIC4.92□□□□□ -1.62
TOP1P11387 RNA5SP311-201ENST00000411290 116 ntBASIC4.92□□□□□ -1.62
TOP1P11387 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.92□□□□□ -1.62
TOP1P11387 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.92□□□□□ -1.62
TOP1P11387 AC069285.2-201ENST00000440210 275 ntBASIC4.92□□□□□ -1.62
TOP1P11387 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
TOP1P11387 AC079804.1-201ENST00000461922 436 ntBASIC4.92□□□□□ -1.62
TOP1P11387 RPS7P7-201ENST00000463499 571 ntBASIC4.92□□□□□ -1.62
TOP1P11387 RPL5P30-201ENST00000465511 891 ntBASIC4.92□□□□□ -1.62
TOP1P11387 METTL15P1-201ENST00000481421 1045 ntBASIC4.92□□□□□ -1.62
TOP1P11387 AC108145.1-201ENST00000503770 153 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms