Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 RPL7P22-201ENST00000466005 733 ntBASIC3.61□□□□□ -1.83
CD74P04233 RPL35AP15-201ENST00000468042 339 ntBASIC3.61□□□□□ -1.83
CD74P04233 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.61□□□□□ -1.83
CD74P04233 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.61□□□□□ -1.83
CD74P04233 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CD74P04233 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.61□□□□□ -1.83
CD74P04233 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.61□□□□□ -1.83
CD74P04233 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.61□□□□□ -1.83
CD74P04233 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.61□□□□□ -1.83
CD74P04233 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.61□□□□□ -1.83
CD74P04233 AC007599.1-201ENST00000568688 1174 ntBASIC3.61□□□□□ -1.83
CD74P04233 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.61□□□□□ -1.83
CD74P04233 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.61□□□□□ -1.83
CD74P04233 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.61□□□□□ -1.83
CD74P04233 AL512782.1-201ENST00000603093 364 ntBASIC3.61□□□□□ -1.83
CD74P04233 AP003392.5-201ENST00000607857 415 ntBASIC3.61□□□□□ -1.83
CD74P04233 AC100847.1-201ENST00000611316 481 ntBASIC3.61□□□□□ -1.83
CD74P04233 RN7SL722P-201ENST00000617780 284 ntBASIC3.61□□□□□ -1.83
CD74P04233 RN7SL565P-201ENST00000618246 284 ntBASIC3.61□□□□□ -1.83
CD74P04233 AL133370.2-201ENST00000619934 439 ntBASIC3.61□□□□□ -1.83
CD74P04233 AP000843.1-201ENST00000624880 701 ntBASIC3.61□□□□□ -1.83
CD74P04233 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
CD74P04233 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.61□□□□□ -1.83
CD74P04233 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.61□□□□□ -1.83
CD74P04233 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.61□□□□□ -1.83
CD74P04233 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CD74P04233 BDP1P-201ENST00000582658 1990 ntBASIC3.61□□□□□ -1.83
CD74P04233 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
CD74P04233 AC096656.1-201ENST00000623826 1364 ntBASIC3.61□□□□□ -1.83
CD74P04233 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CD74P04233 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.6□□□□□ -1.83
CD74P04233 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CD74P04233 MAPK10-263ENST00000641052 4307 ntBASIC3.6□□□□□ -1.83
CD74P04233 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CD74P04233 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CD74P04233 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CD74P04233 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CD74P04233 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CD74P04233 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CD74P04233 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CD74P04233 AC097374.1-203ENST00000400783 485 ntBASIC3.6□□□□□ -1.83
CD74P04233 RN7SKP222-201ENST00000410651 315 ntBASIC3.6□□□□□ -1.83
CD74P04233 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CD74P04233 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.6□□□□□ -1.83
CD74P04233 SAGE2P-201ENST00000420011 2126 ntBASIC3.6□□□□□ -1.83
CD74P04233 RFESDP1-201ENST00000422350 461 ntBASIC3.6□□□□□ -1.83
CD74P04233 EIF1P3-201ENST00000423841 334 ntBASIC3.6□□□□□ -1.83
CD74P04233 USP12PY-201ENST00000427677 1064 ntBASIC3.6□□□□□ -1.83
CD74P04233 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.6□□□□□ -1.83
CD74P04233 ATP5HP2-201ENST00000433885 485 ntBASIC3.6□□□□□ -1.83
CD74P04233 MTCYBP29-201ENST00000436327 1006 ntBASIC3.6□□□□□ -1.83
CD74P04233 AC006466.1-201ENST00000438721 289 ntBASIC3.6□□□□□ -1.83
CD74P04233 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.6□□□□□ -1.83
CD74P04233 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.6□□□□□ -1.83
CD74P04233 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.6□□□□□ -1.83
CD74P04233 AC005912.1-201ENST00000495392 255 ntBASIC3.6□□□□□ -1.83
CD74P04233 AC092045.1-201ENST00000495716 1231 ntBASIC3.6□□□□□ -1.83
CD74P04233 OR52A4P-203ENST00000498233 1014 ntBASIC3.6□□□□□ -1.83
CD74P04233 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.6□□□□□ -1.83
CD74P04233 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.6□□□□□ -1.83
CD74P04233 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.6□□□□□ -1.83
CD74P04233 AC110775.1-201ENST00000513721 462 ntBASIC3.6□□□□□ -1.83
CD74P04233 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC3.6□□□□□ -1.83
CD74P04233 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.6□□□□□ -1.83
CD74P04233 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.6□□□□□ -1.83
CD74P04233 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.6□□□□□ -1.83
CD74P04233 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.6□□□□□ -1.83
CD74P04233 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.6□□□□□ -1.83
CD74P04233 RFPL1S-203ENST00000539579 330 ntBASIC3.6□□□□□ -1.83
CD74P04233 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.6□□□□□ -1.83
CD74P04233 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.6□□□□□ -1.83
CD74P04233 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.6□□□□□ -1.83
CD74P04233 VN1R79P-201ENST00000593540 513 ntBASIC3.6□□□□□ -1.83
CD74P04233 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.6□□□□□ -1.83
CD74P04233 AC104785.1-201ENST00000603220 588 ntBASIC3.6□□□□□ -1.83
CD74P04233 AC079587.1-201ENST00000603846 277 ntBASIC3.6□□□□□ -1.83
CD74P04233 AC098935.2-201ENST00000604222 466 ntBASIC3.6□□□□□ -1.83
CD74P04233 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CD74P04233 AL021997.2-201ENST00000615674 271 ntBASIC3.6□□□□□ -1.83
CD74P04233 AL590410.1-201ENST00000617925 333 ntBASIC3.6□□□□□ -1.83
CD74P04233 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC3.6□□□□□ -1.83
CD74P04233 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.6□□□□□ -1.83
CD74P04233 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.6□□□□□ -1.83
CD74P04233 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CD74P04233 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CD74P04233 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
CD74P04233 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CD74P04233 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CD74P04233 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CD74P04233 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CD74P04233 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.6□□□□□ -1.83
CD74P04233 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CD74P04233 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.59□□□□□ -1.83
CD74P04233 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CD74P04233 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
CD74P04233 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CD74P04233 MFSD8-242ENST00000641690 4199 ntBASIC3.59□□□□□ -1.83
CD74P04233 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.59□□□□□ -1.83
CD74P04233 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CD74P04233 RNA5SP123-201ENST00000363244 119 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms