Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AL391261.4-201ENST00000616012 481 ntBASIC3.56□□□□□ -1.84
HLA-DQB1P01920 RMST_5.1-201ENST00000618704 126 ntBASIC3.56□□□□□ -1.84
HLA-DQB1P01920 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DQB1P01920 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.56□□□□□ -1.84
HLA-DQB1P01920 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DQB1P01920 AC134882.1-201ENST00000603738 1676 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 AC095050.2-201ENST00000510748 1458 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 TNPO1P3-201ENST00000436471 2662 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 RNU6-386P-201ENST00000362650 107 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 AL583835.1-201ENST00000399570 407 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 AL035696.2-201ENST00000407941 709 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 SNORA11F-201ENST00000408237 128 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 RPS26P13-201ENST00000419030 330 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 AJ239321.1-201ENST00000424255 564 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 RPS6P12-201ENST00000432491 726 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 NDUFA5P1-201ENST00000433858 341 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 SKP1P1-201ENST00000438081 489 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 RAD1P2-201ENST00000446414 663 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 ARL2BPP10-201ENST00000446487 531 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 CEACAMP6-201ENST00000452007 574 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 RPL36AP13-201ENST00000457490 317 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 PGBD4P4-201ENST00000509673 613 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 RNA5SP73-201ENST00000516744 108 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 MTND1P6-201ENST00000523621 946 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 AC135001.1-201ENST00000544546 283 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 AGGF1P8-201ENST00000562979 1000 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 AC022968.1-201ENST00000567372 442 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 AC069061.3-201ENST00000582254 823 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 AL133247.2-201ENST00000603236 482 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 AL390816.3-201ENST00000604527 1066 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 AC025175.1-201ENST00000606482 759 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 AC100847.1-201ENST00000611316 481 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 MIR7155-201ENST00000615925 56 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 AP005019.3-201ENST00000620418 560 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 AC018445.2-201ENST00000622987 260 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 AL049536.1-201ENST00000625043 744 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 AC140479.6-201ENST00000633535 357 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 AC090971.4-201ENST00000560291 1800 ntBASIC3.55□□□□□ -1.84
HLA-DQB1P01920 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.55□□□□□ -1.84
HLA-DQB1P01920 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DQB1P01920 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DQB1P01920 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
HLA-DQB1P01920 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
HLA-DQB1P01920 AC074029.4-201ENST00000624796 1859 ntBASIC3.54□□□□□ -1.84
HLA-DQB1P01920 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DQB1P01920 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DQB1P01920 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DQB1P01920 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DQB1P01920 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DQB1P01920 MIR331-201ENST00000362302 94 ntBASIC3.54□□□□□ -1.84
HLA-DQB1P01920 NCSTNP1-201ENST00000406229 144 ntBASIC3.54□□□□□ -1.84
HLA-DQB1P01920 UQCRBP1-201ENST00000421129 336 ntBASIC3.54□□□□□ -1.84
HLA-DQB1P01920 RPL7AP25-201ENST00000423357 805 ntBASIC3.54□□□□□ -1.84
HLA-DQB1P01920 CHIAP3-201ENST00000423668 1133 ntBASIC3.54□□□□□ -1.84
HLA-DQB1P01920 AC093084.1-201ENST00000424233 687 ntBASIC3.54□□□□□ -1.84
HLA-DQB1P01920 MTCO1P45-201ENST00000431457 267 ntBASIC3.54□□□□□ -1.84
HLA-DQB1P01920 XKRYP6-201ENST00000440468 1116 ntBASIC3.54□□□□□ -1.84
HLA-DQB1P01920 XKRYP3-201ENST00000442113 1116 ntBASIC3.54□□□□□ -1.84
HLA-DQB1P01920 RPL31P20-201ENST00000449593 360 ntBASIC3.54□□□□□ -1.84
HLA-DQB1P01920 RN7SL329P-201ENST00000467740 299 ntBASIC3.54□□□□□ -1.84
HLA-DQB1P01920 AC117394.1-201ENST00000477323 567 ntBASIC3.54□□□□□ -1.84
HLA-DQB1P01920 RPS29P19-201ENST00000479709 171 ntBASIC3.54□□□□□ -1.84
HLA-DQB1P01920 RN7SL271P-201ENST00000487601 295 ntBASIC3.54□□□□□ -1.84
HLA-DQB1P01920 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DQB1P01920 AC010374.1-201ENST00000503762 1237 ntBASIC3.54□□□□□ -1.84
HLA-DQB1P01920 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DQB1P01920 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.54□□□□□ -1.84
HLA-DQB1P01920 USP9YP5-201ENST00000511770 630 ntBASIC3.54□□□□□ -1.84
HLA-DQB1P01920 AC026726.1-201ENST00000512859 601 ntBASIC3.54□□□□□ -1.84
HLA-DQB1P01920 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DQB1P01920 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms