Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.64□□□□□ -1.67
LDLRP01130 AC021146.3-201ENST00000511911 260 ntBASIC4.64□□□□□ -1.67
LDLRP01130 MTND2P38-201ENST00000522536 667 ntBASIC4.64□□□□□ -1.67
LDLRP01130 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.64□□□□□ -1.67
LDLRP01130 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.64□□□□□ -1.67
LDLRP01130 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.64□□□□□ -1.67
LDLRP01130 AC008083.2-201ENST00000546707 476 ntBASIC4.64□□□□□ -1.67
LDLRP01130 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.64□□□□□ -1.67
LDLRP01130 MTATP6P24-201ENST00000576835 677 ntBASIC4.64□□□□□ -1.67
LDLRP01130 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LDLRP01130 VN1R87P-201ENST00000596706 487 ntBASIC4.64□□□□□ -1.67
LDLRP01130 AC079610.2-201ENST00000604818 690 ntBASIC4.64□□□□□ -1.67
LDLRP01130 AC090525.3-201ENST00000605601 189 ntBASIC4.64□□□□□ -1.67
LDLRP01130 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.64□□□□□ -1.67
LDLRP01130 AC140725.3-201ENST00000616193 880 ntBASIC4.64□□□□□ -1.67
LDLRP01130 AC068831.8-201ENST00000620171 435 ntBASIC4.64□□□□□ -1.67
LDLRP01130 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.64□□□□□ -1.67
LDLRP01130 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.64□□□□□ -1.67
LDLRP01130 AL596275.2-204ENST00000641628 552 ntBASIC4.64□□□□□ -1.67
LDLRP01130 AL596275.2-206ENST00000641957 626 ntBASIC4.64□□□□□ -1.67
LDLRP01130 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LDLRP01130 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.64□□□□□ -1.67
LDLRP01130 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
LDLRP01130 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.64□□□□□ -1.67
LDLRP01130 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
LDLRP01130 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.64□□□□□ -1.67
LDLRP01130 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LDLRP01130 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
LDLRP01130 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.64□□□□□ -1.67
LDLRP01130 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LDLRP01130 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
LDLRP01130 AL672167.1-203ENST00000641299 2975 ntBASIC4.63□□□□□ -1.67
LDLRP01130 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LDLRP01130 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.63□□□□□ -1.67
LDLRP01130 AC090971.4-201ENST00000560291 1800 ntBASIC4.63□□□□□ -1.67
LDLRP01130 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LDLRP01130 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LDLRP01130 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
LDLRP01130 AP002530.1-201ENST00000405705 684 ntBASIC4.63□□□□□ -1.67
LDLRP01130 MIR1182-201ENST00000408363 97 ntBASIC4.63□□□□□ -1.67
LDLRP01130 U3.35-201ENST00000408405 208 ntBASIC4.63□□□□□ -1.67
LDLRP01130 RPS3AP25-201ENST00000411660 793 ntBASIC4.63□□□□□ -1.67
LDLRP01130 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.63□□□□□ -1.67
LDLRP01130 EI24P4-201ENST00000423683 1078 ntBASIC4.63□□□□□ -1.67
LDLRP01130 USP12PY-201ENST00000427677 1064 ntBASIC4.63□□□□□ -1.67
LDLRP01130 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.63□□□□□ -1.67
LDLRP01130 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.63□□□□□ -1.67
LDLRP01130 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.63□□□□□ -1.67
LDLRP01130 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.63□□□□□ -1.67
LDLRP01130 RPS29P9-201ENST00000440360 171 ntBASIC4.63□□□□□ -1.67
LDLRP01130 HMGB3P9-201ENST00000441799 583 ntBASIC4.63□□□□□ -1.67
LDLRP01130 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.63□□□□□ -1.67
LDLRP01130 AL096803.2-201ENST00000450032 677 ntBASIC4.63□□□□□ -1.67
LDLRP01130 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.63□□□□□ -1.67
LDLRP01130 APOOP2-201ENST00000461561 539 ntBASIC4.63□□□□□ -1.67
LDLRP01130 AC006967.1-201ENST00000467608 589 ntBASIC4.63□□□□□ -1.67
LDLRP01130 CCDC75P1-201ENST00000469247 791 ntBASIC4.63□□□□□ -1.67
LDLRP01130 DEFB109F-201ENST00000491870 277 ntBASIC4.63□□□□□ -1.67
LDLRP01130 AC082651.2-201ENST00000496833 166 ntBASIC4.63□□□□□ -1.67
LDLRP01130 AC093720.1-201ENST00000505681 714 ntBASIC4.63□□□□□ -1.67
LDLRP01130 AC069306.1-201ENST00000507006 843 ntBASIC4.63□□□□□ -1.67
LDLRP01130 AC012339.2-201ENST00000523996 453 ntBASIC4.63□□□□□ -1.67
LDLRP01130 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.63□□□□□ -1.67
LDLRP01130 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.63□□□□□ -1.67
LDLRP01130 AP003717.3-201ENST00000544832 1180 ntBASIC4.63□□□□□ -1.67
LDLRP01130 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.63□□□□□ -1.67
LDLRP01130 AC087477.6-201ENST00000559595 843 ntBASIC4.63□□□□□ -1.67
LDLRP01130 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.63□□□□□ -1.67
LDLRP01130 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.63□□□□□ -1.67
LDLRP01130 MIR1254-2-201ENST00000579553 63 ntBASIC4.63□□□□□ -1.67
LDLRP01130 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.63□□□□□ -1.67
LDLRP01130 AC020910.2-201ENST00000603635 610 ntBASIC4.63□□□□□ -1.67
LDLRP01130 AC114878.2-201ENST00000604863 1251 ntBASIC4.63□□□□□ -1.67
LDLRP01130 AC112220.2-201ENST00000605513 533 ntBASIC4.63□□□□□ -1.67
LDLRP01130 AL353600.1-201ENST00000608148 251 ntBASIC4.63□□□□□ -1.67
LDLRP01130 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.63□□□□□ -1.67
LDLRP01130 AC093783.1-201ENST00000612976 329 ntBASIC4.63□□□□□ -1.67
LDLRP01130 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.63□□□□□ -1.67
LDLRP01130 AC006338.2-201ENST00000616864 791 ntBASIC4.63□□□□□ -1.67
LDLRP01130 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.63□□□□□ -1.67
LDLRP01130 AL356863.1-201ENST00000623378 1080 ntBASIC4.63□□□□□ -1.67
LDLRP01130 AC006963.1-201ENST00000624003 1052 ntBASIC4.63□□□□□ -1.67
LDLRP01130 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
LDLRP01130 AC083865.1-201ENST00000636634 831 ntBASIC4.63□□□□□ -1.67
LDLRP01130 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
LDLRP01130 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LDLRP01130 HSPD1P14-201ENST00000432666 1618 ntBASIC4.63□□□□□ -1.67
LDLRP01130 AL645568.2-201ENST00000432815 1337 ntBASIC4.63□□□□□ -1.67
LDLRP01130 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LDLRP01130 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
LDLRP01130 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
LDLRP01130 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LDLRP01130 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.63□□□□□ -1.67
LDLRP01130 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LDLRP01130 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LDLRP01130 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
LDLRP01130 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LDLRP01130 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LDLRP01130 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LDLRP01130 ASNSP1-201ENST00000518311 1939 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 385.1 ms