Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SNRNP200O75643 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SNRNP200O75643 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SNRNP200O75643 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
SNRNP200O75643 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SNRNP200O75643 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SNRNP200O75643 DDX18P6-201ENST00000450119 1997 ntBASIC3.75□□□□□ -1.81
SNRNP200O75643 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SNRNP200O75643 SNORA5A-201ENST00000384111 134 ntBASIC3.74□□□□□ -1.81
SNRNP200O75643 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.74□□□□□ -1.81
SNRNP200O75643 HIGD1AP4-201ENST00000430194 280 ntBASIC3.74□□□□□ -1.81
SNRNP200O75643 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.74□□□□□ -1.81
SNRNP200O75643 AC092691.2-201ENST00000461787 803 ntBASIC3.74□□□□□ -1.81
SNRNP200O75643 SUMO2P4-201ENST00000504193 276 ntBASIC3.74□□□□□ -1.81
SNRNP200O75643 AC008802.1-201ENST00000519121 791 ntBASIC3.74□□□□□ -1.81
SNRNP200O75643 SETP1-201ENST00000556014 845 ntBASIC3.74□□□□□ -1.81
SNRNP200O75643 RN7SL371P-201ENST00000578099 267 ntBASIC3.74□□□□□ -1.81
SNRNP200O75643 AL354798.1-201ENST00000622505 329 ntBASIC3.74□□□□□ -1.81
SNRNP200O75643 AC055839.1-201ENST00000634467 498 ntBASIC3.74□□□□□ -1.81
SNRNP200O75643 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
SNRNP200O75643 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.74□□□□□ -1.81
SNRNP200O75643 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SNRNP200O75643 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SNRNP200O75643 AL356967.1-201ENST00000406305 431 ntBASIC3.74□□□□□ -1.81
SNRNP200O75643 SNORA3C-201ENST00000408792 125 ntBASIC3.74□□□□□ -1.81
SNRNP200O75643 RN7SKP202-201ENST00000410439 330 ntBASIC3.74□□□□□ -1.81
SNRNP200O75643 OR8F1P-201ENST00000425243 930 ntBASIC3.74□□□□□ -1.81
SNRNP200O75643 TRGV7-201ENST00000427089 353 ntBASIC3.74□□□□□ -1.81
SNRNP200O75643 NPM1P34-201ENST00000428821 893 ntBASIC3.74□□□□□ -1.81
SNRNP200O75643 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.74□□□□□ -1.81
SNRNP200O75643 VN1R105P-201ENST00000486595 910 ntBASIC3.74□□□□□ -1.81
SNRNP200O75643 RN7SL323P-201ENST00000494712 295 ntBASIC3.74□□□□□ -1.81
SNRNP200O75643 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.74□□□□□ -1.81
SNRNP200O75643 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.74□□□□□ -1.81
SNRNP200O75643 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SNRNP200O75643 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SNRNP200O75643 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SNRNP200O75643 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SNRNP200O75643 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SNRNP200O75643 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
SNRNP200O75643 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
SNRNP200O75643 AP002001.2-201ENST00000529025 1469 ntBASIC3.73□□□□□ -1.81
SNRNP200O75643 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
SNRNP200O75643 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SNRNP200O75643 AC093775.1-201ENST00000624154 1868 ntBASIC3.73□□□□□ -1.81
SNRNP200O75643 Z82217.1-201ENST00000625157 8149 ntBASIC3.73□□□□□ -1.81
SNRNP200O75643 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
SNRNP200O75643 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.73□□□□□ -1.81
SNRNP200O75643 RPL17P36-201ENST00000420302 549 ntBASIC3.73□□□□□ -1.81
SNRNP200O75643 CDC27P1-201ENST00000445384 715 ntBASIC3.73□□□□□ -1.81
SNRNP200O75643 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.73□□□□□ -1.81
SNRNP200O75643 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SNRNP200O75643 MTCO1P49-201ENST00000523429 802 ntBASIC3.73□□□□□ -1.81
SNRNP200O75643 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.73□□□□□ -1.81
SNRNP200O75643 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.73□□□□□ -1.81
SNRNP200O75643 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.73□□□□□ -1.81
SNRNP200O75643 GNRHR2P1-201ENST00000555315 631 ntBASIC3.73□□□□□ -1.81
SNRNP200O75643 ASNSP1-204ENST00000641977 1664 ntBASIC3.73□□□□□ -1.81
SNRNP200O75643 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
SNRNP200O75643 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.73□□□□□ -1.81
SNRNP200O75643 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SNRNP200O75643 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SNRNP200O75643 RNU1-64P-201ENST00000365443 163 ntBASIC3.73□□□□□ -1.81
SNRNP200O75643 MIR1251-201ENST00000408552 70 ntBASIC3.73□□□□□ -1.81
SNRNP200O75643 RNU2-22P-201ENST00000411266 212 ntBASIC3.73□□□□□ -1.81
SNRNP200O75643 RPL36AP36-201ENST00000418616 301 ntBASIC3.73□□□□□ -1.81
SNRNP200O75643 AC092447.2-201ENST00000435487 669 ntBASIC3.73□□□□□ -1.81
SNRNP200O75643 AC073587.1-201ENST00000447093 876 ntBASIC3.73□□□□□ -1.81
SNRNP200O75643 UBDP1-202ENST00000457888 382 ntBASIC3.73□□□□□ -1.81
SNRNP200O75643 AC091544.1-201ENST00000484702 348 ntBASIC3.73□□□□□ -1.81
SNRNP200O75643 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.73□□□□□ -1.81
SNRNP200O75643 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.73□□□□□ -1.81
SNRNP200O75643 OR10D4P-201ENST00000525892 951 ntBASIC3.73□□□□□ -1.81
SNRNP200O75643 MED28P5-201ENST00000528254 438 ntBASIC3.73□□□□□ -1.81
SNRNP200O75643 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.73□□□□□ -1.81
SNRNP200O75643 OR8R1P-201ENST00000543943 764 ntBASIC3.73□□□□□ -1.81
SNRNP200O75643 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.73□□□□□ -1.81
SNRNP200O75643 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.73□□□□□ -1.81
SNRNP200O75643 AL392048.1-201ENST00000613946 534 ntBASIC3.73□□□□□ -1.81
SNRNP200O75643 AC011266.1-201ENST00000624119 3569 ntBASIC3.73□□□□□ -1.81
SNRNP200O75643 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.72□□□□□ -1.81
SNRNP200O75643 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SNRNP200O75643 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.72□□□□□ -1.81
SNRNP200O75643 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
SNRNP200O75643 RN7SKP224-201ENST00000364140 325 ntBASIC3.72□□□□□ -1.81
SNRNP200O75643 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SNRNP200O75643 YWHAEP5-201ENST00000431545 765 ntBASIC3.72□□□□□ -1.81
SNRNP200O75643 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.72□□□□□ -1.81
SNRNP200O75643 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.72□□□□□ -1.81
SNRNP200O75643 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.72□□□□□ -1.81
SNRNP200O75643 OR9M1P-201ENST00000459641 921 ntBASIC3.72□□□□□ -1.81
SNRNP200O75643 AC008155.2-201ENST00000464337 397 ntBASIC3.72□□□□□ -1.81
SNRNP200O75643 AC022795.1-201ENST00000473808 480 ntBASIC3.72□□□□□ -1.81
SNRNP200O75643 RN7SKP83-201ENST00000516512 178 ntBASIC3.72□□□□□ -1.81
SNRNP200O75643 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC3.72□□□□□ -1.81
SNRNP200O75643 TRMT10BP1-201ENST00000519377 943 ntBASIC3.72□□□□□ -1.81
SNRNP200O75643 AC087369.1-201ENST00000520775 996 ntBASIC3.72□□□□□ -1.81
SNRNP200O75643 BNIP3P5-201ENST00000562290 498 ntBASIC3.72□□□□□ -1.81
SNRNP200O75643 CYP4A43P-201ENST00000568156 121 ntBASIC3.72□□□□□ -1.81
SNRNP200O75643 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms