Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SSX4O60224 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSX4O60224 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SSX4O60224 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSX4O60224 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.42□□□□□ -1.7
SSX4O60224 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SSX4O60224 SNORA66-201ENST00000384792 133 ntBASIC4.42□□□□□ -1.7
SSX4O60224 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSX4O60224 AP000580.1-201ENST00000404439 358 ntBASIC4.42□□□□□ -1.7
SSX4O60224 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.42□□□□□ -1.7
SSX4O60224 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.42□□□□□ -1.7
SSX4O60224 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.42□□□□□ -1.7
SSX4O60224 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.42□□□□□ -1.7
SSX4O60224 AC092634.2-201ENST00000428146 1010 ntBASIC4.42□□□□□ -1.7
SSX4O60224 AL360081.1-201ENST00000428299 555 ntBASIC4.42□□□□□ -1.7
SSX4O60224 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.42□□□□□ -1.7
SSX4O60224 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.42□□□□□ -1.7
SSX4O60224 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.42□□□□□ -1.7
SSX4O60224 UBE2V1P5-201ENST00000440070 405 ntBASIC4.42□□□□□ -1.7
SSX4O60224 MTCO1P53-201ENST00000441633 699 ntBASIC4.42□□□□□ -1.7
SSX4O60224 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.42□□□□□ -1.7
SSX4O60224 AC073587.1-201ENST00000447093 876 ntBASIC4.42□□□□□ -1.7
SSX4O60224 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.42□□□□□ -1.7
SSX4O60224 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.42□□□□□ -1.7
SSX4O60224 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.42□□□□□ -1.7
SSX4O60224 AC244505.3-201ENST00000454598 187 ntBASIC4.42□□□□□ -1.7
SSX4O60224 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.42□□□□□ -1.7
SSX4O60224 RPL37P3-201ENST00000456825 293 ntBASIC4.42□□□□□ -1.7
SSX4O60224 AC006511.1-201ENST00000470614 315 ntBASIC4.42□□□□□ -1.7
SSX4O60224 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.42□□□□□ -1.7
SSX4O60224 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.42□□□□□ -1.7
SSX4O60224 HPRT1P2-201ENST00000505250 544 ntBASIC4.42□□□□□ -1.7
SSX4O60224 AC008837.1-201ENST00000511513 412 ntBASIC4.42□□□□□ -1.7
SSX4O60224 RN7SKP283-201ENST00000517197 270 ntBASIC4.42□□□□□ -1.7
SSX4O60224 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.42□□□□□ -1.7
SSX4O60224 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.42□□□□□ -1.7
SSX4O60224 AC008562.1-201ENST00000521763 330 ntBASIC4.42□□□□□ -1.7
SSX4O60224 OR5AZ1P-201ENST00000527448 943 ntBASIC4.42□□□□□ -1.7
SSX4O60224 NDUFS5P6-201ENST00000529136 295 ntBASIC4.42□□□□□ -1.7
SSX4O60224 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.42□□□□□ -1.7
SSX4O60224 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.42□□□□□ -1.7
SSX4O60224 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.42□□□□□ -1.7
SSX4O60224 EDDM3DP-201ENST00000554692 434 ntBASIC4.42□□□□□ -1.7
SSX4O60224 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSX4O60224 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SSX4O60224 AC018552.3-201ENST00000567416 561 ntBASIC4.42□□□□□ -1.7
SSX4O60224 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.42□□□□□ -1.7
SSX4O60224 AC090312.2-201ENST00000582687 378 ntBASIC4.42□□□□□ -1.7
SSX4O60224 MIR4760-201ENST00000585040 80 ntBASIC4.42□□□□□ -1.7
SSX4O60224 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.42□□□□□ -1.7
SSX4O60224 AC009948.4-201ENST00000604692 675 ntBASIC4.42□□□□□ -1.7
SSX4O60224 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.42□□□□□ -1.7
SSX4O60224 CDRT1-208ENST00000630868 794 ntBASIC4.42□□□□□ -1.7
SSX4O60224 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSX4O60224 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSX4O60224 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSX4O60224 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.42□□□□□ -1.7
SSX4O60224 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.42□□□□□ -1.7
SSX4O60224 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SSX4O60224 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SSX4O60224 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSX4O60224 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.41□□□□□ -1.7
SSX4O60224 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSX4O60224 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.41□□□□□ -1.7
SSX4O60224 MAPK10-286ENST00000641208 8747 ntBASIC4.41□□□□□ -1.7
SSX4O60224 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSX4O60224 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSX4O60224 AC119744.1-201ENST00000454746 1715 ntBASIC4.41□□□□□ -1.7
SSX4O60224 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SSX4O60224 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSX4O60224 AC087190.4-201ENST00000574616 8334 ntBASIC4.41□□□□□ -1.7
SSX4O60224 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.41□□□□□ -1.7
SSX4O60224 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSX4O60224 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SSX4O60224 AC008549.2-201ENST00000333482 706 ntBASIC4.41□□□□□ -1.7
SSX4O60224 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SSX4O60224 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.41□□□□□ -1.7
SSX4O60224 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SSX4O60224 SNORA56-201ENST00000383966 129 ntBASIC4.41□□□□□ -1.7
SSX4O60224 RNU6-549P-201ENST00000384433 107 ntBASIC4.41□□□□□ -1.7
SSX4O60224 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SSX4O60224 OR8V1P-201ENST00000395193 873 ntBASIC4.41□□□□□ -1.7
SSX4O60224 RNU6-77P-201ENST00000410554 91 ntBASIC4.41□□□□□ -1.7
SSX4O60224 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.41□□□□□ -1.7
SSX4O60224 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.41□□□□□ -1.7
SSX4O60224 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.41□□□□□ -1.7
SSX4O60224 SFR1P2-201ENST00000421841 730 ntBASIC4.41□□□□□ -1.7
SSX4O60224 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SSX4O60224 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.41□□□□□ -1.7
SSX4O60224 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.41□□□□□ -1.7
SSX4O60224 AC114973.1-201ENST00000429057 632 ntBASIC4.41□□□□□ -1.7
SSX4O60224 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSX4O60224 PRPF38AP2-201ENST00000438179 851 ntBASIC4.41□□□□□ -1.7
SSX4O60224 TXNP5-201ENST00000441043 315 ntBASIC4.41□□□□□ -1.7
SSX4O60224 RRM2P4-201ENST00000441721 562 ntBASIC4.41□□□□□ -1.7
SSX4O60224 EXOSC3P1-201ENST00000448649 500 ntBASIC4.41□□□□□ -1.7
SSX4O60224 MRPL35P4-201ENST00000453682 566 ntBASIC4.41□□□□□ -1.7
SSX4O60224 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.41□□□□□ -1.7
SSX4O60224 RPL6P9-201ENST00000466502 859 ntBASIC4.41□□□□□ -1.7
SSX4O60224 RN7SL189P-201ENST00000468631 289 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms