Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 FAM27D1-201ENST00000612308 341 ntBASIC4.68□□□□□ -1.66
CLDN3O15551 AL445567.2-201ENST00000618935 498 ntBASIC4.68□□□□□ -1.66
CLDN3O15551 AL445363.3-201ENST00000623080 671 ntBASIC4.68□□□□□ -1.66
CLDN3O15551 AC019278.1-201ENST00000623516 479 ntBASIC4.68□□□□□ -1.66
CLDN3O15551 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.68□□□□□ -1.66
CLDN3O15551 BMS1P21-201ENST00000634565 365 ntBASIC4.68□□□□□ -1.66
CLDN3O15551 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.68□□□□□ -1.66
CLDN3O15551 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CLDN3O15551 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.68□□□□□ -1.66
CLDN3O15551 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN3O15551 MAPK10-304ENST00000641341 3984 ntBASIC4.68□□□□□ -1.66
CLDN3O15551 AL451142.2-201ENST00000429076 2090 ntBASIC4.68□□□□□ -1.66
CLDN3O15551 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN3O15551 AC027290.2-201ENST00000623210 18662 ntBASIC4.67□□□□□ -1.66
CLDN3O15551 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN3O15551 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CLDN3O15551 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN3O15551 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN3O15551 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
CLDN3O15551 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN3O15551 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
CLDN3O15551 SNORA70.2-201ENST00000364506 135 ntBASIC4.67□□□□□ -1.66
CLDN3O15551 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN3O15551 SNORD66.1-201ENST00000391230 76 ntBASIC4.67□□□□□ -1.66
CLDN3O15551 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.67□□□□□ -1.66
CLDN3O15551 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN3O15551 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.67□□□□□ -1.66
CLDN3O15551 RNA5SP498-201ENST00000411342 120 ntBASIC4.67□□□□□ -1.66
CLDN3O15551 AC073464.3-201ENST00000422564 712 ntBASIC4.67□□□□□ -1.66
CLDN3O15551 RBMY1KP-201ENST00000423480 476 ntBASIC4.67□□□□□ -1.66
CLDN3O15551 SKP1P3-201ENST00000429280 487 ntBASIC4.67□□□□□ -1.66
CLDN3O15551 AL357520.1-201ENST00000441557 453 ntBASIC4.67□□□□□ -1.66
CLDN3O15551 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.67□□□□□ -1.66
CLDN3O15551 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN3O15551 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CLDN3O15551 RN7SL860P-201ENST00000473738 223 ntBASIC4.67□□□□□ -1.66
CLDN3O15551 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN3O15551 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.67□□□□□ -1.66
CLDN3O15551 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.67□□□□□ -1.66
CLDN3O15551 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN3O15551 RNA5SP519-201ENST00000516480 119 ntBASIC4.67□□□□□ -1.66
CLDN3O15551 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.67□□□□□ -1.66
CLDN3O15551 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN3O15551 AC006064.5-201ENST00000541782 248 ntBASIC4.67□□□□□ -1.66
CLDN3O15551 AC008083.2-201ENST00000546707 476 ntBASIC4.67□□□□□ -1.66
CLDN3O15551 PARP1P2-201ENST00000556806 195 ntBASIC4.67□□□□□ -1.66
CLDN3O15551 AC090312.1-201ENST00000580637 348 ntBASIC4.67□□□□□ -1.66
CLDN3O15551 AC011477.5-201ENST00000586571 259 ntBASIC4.67□□□□□ -1.66
CLDN3O15551 AL049844.2-201ENST00000604280 628 ntBASIC4.67□□□□□ -1.66
CLDN3O15551 AL590392.1-201ENST00000604960 446 ntBASIC4.67□□□□□ -1.66
CLDN3O15551 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.67□□□□□ -1.66
CLDN3O15551 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.67□□□□□ -1.66
CLDN3O15551 MIR7154-201ENST00000620673 73 ntBASIC4.67□□□□□ -1.66
CLDN3O15551 AL596275.2-204ENST00000641628 552 ntBASIC4.67□□□□□ -1.66
CLDN3O15551 AL596275.2-206ENST00000641957 626 ntBASIC4.67□□□□□ -1.66
CLDN3O15551 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CLDN3O15551 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.67□□□□□ -1.66
CLDN3O15551 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN3O15551 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CLDN3O15551 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN3O15551 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CLDN3O15551 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN3O15551 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.67□□□□□ -1.66
CLDN3O15551 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CLDN3O15551 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN3O15551 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
CLDN3O15551 AC005261.4-201ENST00000600047 1385 ntBASIC4.66□□□□□ -1.66
CLDN3O15551 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN3O15551 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.66□□□□□ -1.66
CLDN3O15551 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CLDN3O15551 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN3O15551 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.66□□□□□ -1.66
CLDN3O15551 PHKBP1-201ENST00000450951 1951 ntBASIC4.66□□□□□ -1.66
CLDN3O15551 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN3O15551 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN3O15551 MIR383-201ENST00000362257 73 ntBASIC4.66□□□□□ -1.66
CLDN3O15551 RNA5SP28-201ENST00000363841 119 ntBASIC4.66□□□□□ -1.66
CLDN3O15551 VN1R8P-201ENST00000407739 893 ntBASIC4.66□□□□□ -1.66
CLDN3O15551 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.66□□□□□ -1.66
CLDN3O15551 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.66□□□□□ -1.66
CLDN3O15551 RPL23AP38-201ENST00000423801 469 ntBASIC4.66□□□□□ -1.66
CLDN3O15551 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.66□□□□□ -1.66
CLDN3O15551 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.66□□□□□ -1.66
CLDN3O15551 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.66□□□□□ -1.66
CLDN3O15551 AC023512.1-201ENST00000444513 499 ntBASIC4.66□□□□□ -1.66
CLDN3O15551 ABCF2P2-201ENST00000450549 296 ntBASIC4.66□□□□□ -1.66
CLDN3O15551 AC005229.2-201ENST00000456995 399 ntBASIC4.66□□□□□ -1.66
CLDN3O15551 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.66□□□□□ -1.66
CLDN3O15551 AC022795.1-201ENST00000473808 480 ntBASIC4.66□□□□□ -1.66
CLDN3O15551 AC090543.1-201ENST00000492168 485 ntBASIC4.66□□□□□ -1.66
CLDN3O15551 RNU6-751P-201ENST00000516382 101 ntBASIC4.66□□□□□ -1.66
CLDN3O15551 AP003730.1-201ENST00000524605 285 ntBASIC4.66□□□□□ -1.66
CLDN3O15551 PHBP17-201ENST00000528576 541 ntBASIC4.66□□□□□ -1.66
CLDN3O15551 CYCSP29-201ENST00000533731 318 ntBASIC4.66□□□□□ -1.66
CLDN3O15551 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.66□□□□□ -1.66
CLDN3O15551 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.66□□□□□ -1.66
CLDN3O15551 AC069366.1-201ENST00000583159 838 ntBASIC4.66□□□□□ -1.66
CLDN3O15551 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.66□□□□□ -1.66
CLDN3O15551 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.66□□□□□ -1.66
CLDN3O15551 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 153.6 ms