Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.41□□□□□ -1.38
SOX1O00570 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.41□□□□□ -1.38
SOX1O00570 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
SOX1O00570 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SOX1O00570 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
SOX1O00570 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.4□□□□□ -1.38
SOX1O00570 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.4□□□□□ -1.38
SOX1O00570 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.4□□□□□ -1.38
SOX1O00570 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.4□□□□□ -1.38
SOX1O00570 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.4□□□□□ -1.38
SOX1O00570 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.4□□□□□ -1.38
SOX1O00570 MRE11P1-201ENST00000464884 2127 ntBASIC6.4□□□□□ -1.38
SOX1O00570 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SOX1O00570 AC024587.1-201ENST00000505925 2157 ntBASIC6.4□□□□□ -1.38
SOX1O00570 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.38
SOX1O00570 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SOX1O00570 SNORA43.1-201ENST00000364863 140 ntBASIC6.4□□□□□ -1.38
SOX1O00570 SNORD116-23-201ENST00000384645 92 ntBASIC6.4□□□□□ -1.38
SOX1O00570 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.4□□□□□ -1.38
SOX1O00570 MIR1204-201ENST00000408388 67 ntBASIC6.4□□□□□ -1.38
SOX1O00570 CBX1P3-201ENST00000413296 527 ntBASIC6.4□□□□□ -1.38
SOX1O00570 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.4□□□□□ -1.38
SOX1O00570 BOLA3P4-201ENST00000418151 400 ntBASIC6.4□□□□□ -1.38
SOX1O00570 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC6.4□□□□□ -1.38
SOX1O00570 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.4□□□□□ -1.38
SOX1O00570 AL034379.1-201ENST00000423216 253 ntBASIC6.4□□□□□ -1.38
SOX1O00570 AL360081.1-201ENST00000428299 555 ntBASIC6.4□□□□□ -1.38
SOX1O00570 AC009961.2-201ENST00000435771 251 ntBASIC6.4□□□□□ -1.38
SOX1O00570 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.4□□□□□ -1.38
SOX1O00570 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC6.4□□□□□ -1.38
SOX1O00570 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC6.4□□□□□ -1.38
SOX1O00570 FABP3P2-201ENST00000453169 399 ntBASIC6.4□□□□□ -1.38
SOX1O00570 MTCO3P20-201ENST00000454926 688 ntBASIC6.4□□□□□ -1.38
SOX1O00570 AC022364.2-201ENST00000457963 554 ntBASIC6.4□□□□□ -1.38
SOX1O00570 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.4□□□□□ -1.38
SOX1O00570 AC021074.2-201ENST00000468434 172 ntBASIC6.4□□□□□ -1.38
SOX1O00570 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC6.4□□□□□ -1.38
SOX1O00570 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC6.4□□□□□ -1.38
SOX1O00570 HMGB1P23-201ENST00000518743 568 ntBASIC6.4□□□□□ -1.38
SOX1O00570 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.4□□□□□ -1.38
SOX1O00570 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC6.4□□□□□ -1.38
SOX1O00570 MRPS16P1-201ENST00000523462 412 ntBASIC6.4□□□□□ -1.38
SOX1O00570 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC6.4□□□□□ -1.38
SOX1O00570 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SOX1O00570 AC068587.4-201ENST00000533893 186 ntBASIC6.4□□□□□ -1.38
SOX1O00570 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC6.4□□□□□ -1.38
SOX1O00570 AC008083.2-201ENST00000546707 476 ntBASIC6.4□□□□□ -1.38
SOX1O00570 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.4□□□□□ -1.38
SOX1O00570 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.4□□□□□ -1.38
SOX1O00570 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC6.4□□□□□ -1.38
SOX1O00570 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC6.4□□□□□ -1.38
SOX1O00570 ATP5J2P6-201ENST00000565203 266 ntBASIC6.4□□□□□ -1.38
SOX1O00570 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC6.4□□□□□ -1.38
SOX1O00570 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.4□□□□□ -1.38
SOX1O00570 AL161729.3-201ENST00000603533 673 ntBASIC6.4□□□□□ -1.38
SOX1O00570 YWHAQP7-201ENST00000603536 658 ntBASIC6.4□□□□□ -1.38
SOX1O00570 AC018695.5-201ENST00000605872 315 ntBASIC6.4□□□□□ -1.38
SOX1O00570 AC104010.1-201ENST00000616889 150 ntBASIC6.4□□□□□ -1.38
SOX1O00570 AC023509.5-201ENST00000617434 807 ntBASIC6.4□□□□□ -1.38
SOX1O00570 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.4□□□□□ -1.38
SOX1O00570 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.4□□□□□ -1.38
SOX1O00570 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.4□□□□□ -1.38
SOX1O00570 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
SOX1O00570 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SOX1O00570 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SOX1O00570 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
SOX1O00570 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.4□□□□□ -1.39
SOX1O00570 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SOX1O00570 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
SOX1O00570 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SOX1O00570 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.39
SOX1O00570 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SOX1O00570 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.4□□□□□ -1.39
SOX1O00570 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SOX1O00570 MTCO1P14-201ENST00000441695 1559 ntBASIC6.4□□□□□ -1.39
SOX1O00570 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
SOX1O00570 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SOX1O00570 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.39□□□□□ -1.39
SOX1O00570 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
SOX1O00570 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SOX1O00570 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.39□□□□□ -1.39
SOX1O00570 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.39□□□□□ -1.39
SOX1O00570 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
SOX1O00570 AC127070.3-201ENST00000503695 3263 ntBASIC6.39□□□□□ -1.39
SOX1O00570 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SOX1O00570 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SOX1O00570 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
SOX1O00570 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SOX1O00570 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SOX1O00570 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SOX1O00570 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SOX1O00570 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC6.39□□□□□ -1.39
SOX1O00570 AC007842.1-201ENST00000597336 2039 ntBASIC6.39□□□□□ -1.39
SOX1O00570 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SOX1O00570 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SOX1O00570 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.39□□□□□ -1.39
SOX1O00570 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SOX1O00570 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.39□□□□□ -1.39
SOX1O00570 RNU6-878P-201ENST00000384578 110 ntBASIC6.39□□□□□ -1.39
SOX1O00570 SNRPEP2-201ENST00000397592 279 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms