Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.35□□□□□ -1.55
FOXN3O00409 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.35□□□□□ -1.55
FOXN3O00409 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.35□□□□□ -1.55
FOXN3O00409 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.35□□□□□ -1.55
FOXN3O00409 AC133552.5-201ENST00000604266 540 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.35□□□□□ -1.55
FOXN3O00409 AC093783.1-201ENST00000612976 329 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 AL627230.1-201ENST00000613077 211 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 AC037198.3-201ENST00000616754 526 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 AL591926.8-201ENST00000616876 211 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 AC091304.6-201ENST00000619761 202 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 AC022079.1-201ENST00000621546 602 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 AC019226.2-201ENST00000625973 424 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.35□□□□□ -1.55
FOXN3O00409 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
FOXN3O00409 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
FOXN3O00409 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
FOXN3O00409 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
FOXN3O00409 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
FOXN3O00409 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.35□□□□□ -1.55
FOXN3O00409 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
FOXN3O00409 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
FOXN3O00409 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
FOXN3O00409 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
FOXN3O00409 AC092162.3-201ENST00000624511 1624 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 MTCO1P11-201ENST00000429111 1528 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
FOXN3O00409 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
FOXN3O00409 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
FOXN3O00409 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
FOXN3O00409 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
FOXN3O00409 RNU4-40P-201ENST00000364351 143 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
FOXN3O00409 ERHP2-201ENST00000402323 299 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 CTSL3P-202ENST00000412179 788 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 AP000534.2-201ENST00000412729 568 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 OR51A3P-201ENST00000413596 924 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 DDX39BP1-205ENST00000422507 192 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 AL158073.1-201ENST00000426848 1104 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 RPS20P1-201ENST00000434853 354 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 PPIAP17-201ENST00000438507 471 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.34□□□□□ -1.55
FOXN3O00409 AC092647.3-201ENST00000443044 633 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.34□□□□□ -1.55
FOXN3O00409 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.34□□□□□ -1.55
FOXN3O00409 AC079776.3-201ENST00000450665 370 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.34□□□□□ -1.55
FOXN3O00409 GAPDHP39-201ENST00000481866 979 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 RN7SL244P-201ENST00000493405 297 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 RPL5P23-201ENST00000496040 868 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 AC008953.1-201ENST00000497334 318 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.34□□□□□ -1.55
FOXN3O00409 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.34□□□□□ -1.55
FOXN3O00409 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
FOXN3O00409 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.34□□□□□ -1.55
FOXN3O00409 RNU6-513P-201ENST00000516104 104 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 RNA5SP43-201ENST00000516559 110 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 AF186190.1-201ENST00000517470 480 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
FOXN3O00409 OR4C2P-201ENST00000530855 1064 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.34□□□□□ -1.55
FOXN3O00409 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
FOXN3O00409 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.34□□□□□ -1.55
FOXN3O00409 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.34□□□□□ -1.55
FOXN3O00409 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.34□□□□□ -1.55
FOXN3O00409 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.34□□□□□ -1.55
FOXN3O00409 AC090312.1-201ENST00000580637 348 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.34□□□□□ -1.55
FOXN3O00409 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.34□□□□□ -1.55
FOXN3O00409 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.34□□□□□ -1.55
FOXN3O00409 AC008751.2-201ENST00000597885 980 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 AC011453.2-201ENST00000603737 729 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 AC091488.1-201ENST00000604239 660 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.34□□□□□ -1.55
FOXN3O00409 MIR6886-201ENST00000619864 61 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.34□□□□□ -1.55
FOXN3O00409 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.34□□□□□ -1.55
FOXN3O00409 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.34□□□□□ -1.55
FOXN3O00409 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.34□□□□□ -1.55
FOXN3O00409 LINC01739-205ENST00000641890 573 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
FOXN3O00409 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.34□□□□□ -1.55
FOXN3O00409 PHKBP1-201ENST00000450951 1951 ntBASIC5.34□□□□□ -1.55
FOXN3O00409 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.34□□□□□ -1.55
FOXN3O00409 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.34□□□□□ -1.55
FOXN3O00409 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
FOXN3O00409 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.34□□□□□ -1.56
FOXN3O00409 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
FOXN3O00409 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.34□□□□□ -1.56
FOXN3O00409 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
FOXN3O00409 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
FOXN3O00409 ASNSP1-204ENST00000641977 1664 ntBASIC5.34□□□□□ -1.56
FOXN3O00409 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
FOXN3O00409 THAP12P4-201ENST00000528321 2266 ntBASIC5.34□□□□□ -1.56
FOXN3O00409 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
FOXN3O00409 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.33□□□□□ -1.56
FOXN3O00409 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.33□□□□□ -1.56
FOXN3O00409 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.33□□□□□ -1.56
FOXN3O00409 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms