Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AL049745.1-201ENST00000433953 286 ntBASIC4.3□□□□□ -1.72
SLC28A1O00337 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.3□□□□□ -1.72
SLC28A1O00337 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.3□□□□□ -1.72
SLC28A1O00337 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.3□□□□□ -1.72
SLC28A1O00337 RN7SL177P-201ENST00000476596 299 ntBASIC4.3□□□□□ -1.72
SLC28A1O00337 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.3□□□□□ -1.72
SLC28A1O00337 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.3□□□□□ -1.72
SLC28A1O00337 HMGB3P13-201ENST00000511263 607 ntBASIC4.3□□□□□ -1.72
SLC28A1O00337 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.3□□□□□ -1.72
SLC28A1O00337 IGLV3-26-201ENST00000520756 302 ntBASIC4.3□□□□□ -1.72
SLC28A1O00337 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.3□□□□□ -1.72
SLC28A1O00337 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.3□□□□□ -1.72
SLC28A1O00337 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.3□□□□□ -1.72
SLC28A1O00337 AC063949.1-201ENST00000552900 865 ntBASIC4.3□□□□□ -1.72
SLC28A1O00337 AC106785.3-201ENST00000564064 847 ntBASIC4.3□□□□□ -1.72
SLC28A1O00337 RPL23AP97-201ENST00000568955 471 ntBASIC4.3□□□□□ -1.72
SLC28A1O00337 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.3□□□□□ -1.72
SLC28A1O00337 AC133644.2-201ENST00000608142 540 ntBASIC4.3□□□□□ -1.72
SLC28A1O00337 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.3□□□□□ -1.72
SLC28A1O00337 AC009704.2-201ENST00000618739 483 ntBASIC4.3□□□□□ -1.72
SLC28A1O00337 AC097460.3-201ENST00000623099 442 ntBASIC4.3□□□□□ -1.72
SLC28A1O00337 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.3□□□□□ -1.72
SLC28A1O00337 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.3□□□□□ -1.72
SLC28A1O00337 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SLC28A1O00337 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.3□□□□□ -1.72
SLC28A1O00337 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SLC28A1O00337 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SLC28A1O00337 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
SLC28A1O00337 VN2R3P-201ENST00000422626 1412 ntBASIC4.29□□□□□ -1.72
SLC28A1O00337 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SLC28A1O00337 USP9YP4-201ENST00000424401 1745 ntBASIC4.29□□□□□ -1.72
SLC28A1O00337 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.29□□□□□ -1.72
SLC28A1O00337 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SLC28A1O00337 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
SLC28A1O00337 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SLC28A1O00337 OR10J6P-201ENST00000289731 930 ntBASIC4.29□□□□□ -1.72
SLC28A1O00337 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SLC28A1O00337 RNU6-1005P-201ENST00000384519 107 ntBASIC4.29□□□□□ -1.72
SLC28A1O00337 MIR323B-201ENST00000385269 82 ntBASIC4.29□□□□□ -1.72
SLC28A1O00337 AC073136.2-201ENST00000417282 849 ntBASIC4.29□□□□□ -1.72
SLC28A1O00337 AC234782.4-201ENST00000417646 1048 ntBASIC4.29□□□□□ -1.72
SLC28A1O00337 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SLC28A1O00337 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
SLC28A1O00337 HMGB3P9-201ENST00000441799 583 ntBASIC4.29□□□□□ -1.72
SLC28A1O00337 RPL23AP43-201ENST00000446445 471 ntBASIC4.29□□□□□ -1.72
SLC28A1O00337 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.29□□□□□ -1.72
SLC28A1O00337 IFNWP4-201ENST00000453148 294 ntBASIC4.29□□□□□ -1.72
SLC28A1O00337 HIGD1AP8-201ENST00000453927 274 ntBASIC4.29□□□□□ -1.72
SLC28A1O00337 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.29□□□□□ -1.72
SLC28A1O00337 RPL37P3-201ENST00000456825 293 ntBASIC4.29□□□□□ -1.72
SLC28A1O00337 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.29□□□□□ -1.72
SLC28A1O00337 NDUFB5P1-201ENST00000508134 564 ntBASIC4.29□□□□□ -1.72
SLC28A1O00337 PGBD4P4-201ENST00000509673 613 ntBASIC4.29□□□□□ -1.72
SLC28A1O00337 IGKV1-32-201ENST00000519290 311 ntBASIC4.29□□□□□ -1.72
SLC28A1O00337 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.29□□□□□ -1.72
SLC28A1O00337 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.29□□□□□ -1.72
SLC28A1O00337 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SLC28A1O00337 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.29□□□□□ -1.72
SLC28A1O00337 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.29□□□□□ -1.72
SLC28A1O00337 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.29□□□□□ -1.72
SLC28A1O00337 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.29□□□□□ -1.72
SLC28A1O00337 MIR3934-201ENST00000579806 107 ntBASIC4.29□□□□□ -1.72
SLC28A1O00337 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.29□□□□□ -1.72
SLC28A1O00337 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.29□□□□□ -1.72
SLC28A1O00337 NF1P5-201ENST00000588287 448 ntBASIC4.29□□□□□ -1.72
SLC28A1O00337 OR7E18P-201ENST00000592589 702 ntBASIC4.29□□□□□ -1.72
SLC28A1O00337 AL160290.3-201ENST00000604869 165 ntBASIC4.29□□□□□ -1.72
SLC28A1O00337 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.29□□□□□ -1.72
SLC28A1O00337 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.29□□□□□ -1.72
SLC28A1O00337 Z98200.1-201ENST00000607298 470 ntBASIC4.29□□□□□ -1.72
SLC28A1O00337 AC006946.3-201ENST00000609791 756 ntBASIC4.29□□□□□ -1.72
SLC28A1O00337 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.29□□□□□ -1.72
SLC28A1O00337 AC097372.4-201ENST00000625025 466 ntBASIC4.29□□□□□ -1.72
SLC28A1O00337 CASC19-222ENST00000641321 1173 ntBASIC4.29□□□□□ -1.72
SLC28A1O00337 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SLC28A1O00337 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.29□□□□□ -1.72
SLC28A1O00337 HSPA8P19-201ENST00000505359 1517 ntBASIC4.29□□□□□ -1.72
SLC28A1O00337 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SLC28A1O00337 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
SLC28A1O00337 AC131971.1-201ENST00000332881 1482 ntBASIC4.29□□□□□ -1.72
SLC28A1O00337 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SLC28A1O00337 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
SLC28A1O00337 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SLC28A1O00337 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
SLC28A1O00337 AL133243.3-201ENST00000617415 3004 ntBASIC4.29□□□□□ -1.72
SLC28A1O00337 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SLC28A1O00337 AC010928.1-201ENST00000592477 1447 ntBASIC4.29□□□□□ -1.72
SLC28A1O00337 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SLC28A1O00337 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.28□□□□□ -1.72
SLC28A1O00337 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.28□□□□□ -1.72
SLC28A1O00337 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.28□□□□□ -1.72
SLC28A1O00337 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
SLC28A1O00337 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
SLC28A1O00337 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SLC28A1O00337 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SLC28A1O00337 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SLC28A1O00337 Y_RNA.110-201ENST00000363220 99 ntBASIC4.28□□□□□ -1.72
SLC28A1O00337 MIR105-2-201ENST00000385083 81 ntBASIC4.28□□□□□ -1.72
SLC28A1O00337 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.28□□□□□ -1.72
SLC28A1O00337 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms