Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC012603.1-201ENST00000606424 528 ntBASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 AP002360.3-201ENST00000607673 710 ntBASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 AL392048.1-201ENST00000613946 534 ntBASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
TMX2-CTNND1H3BSU7 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.15□□□□□ -1.74
TMX2-CTNND1H3BSU7 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.15□□□□□ -1.74
TMX2-CTNND1H3BSU7 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.15□□□□□ -1.74
TMX2-CTNND1H3BSU7 AL161912.2-201ENST00000565707 3007 ntBASIC4.15□□□□□ -1.74
TMX2-CTNND1H3BSU7 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.15□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC018555.1-201ENST00000567548 1980 ntBASIC4.15□□□□□ -1.74
TMX2-CTNND1H3BSU7 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 RNA5SP502-201ENST00000362694 119 ntBASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 RNU1-14P-201ENST00000362759 152 ntBASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 RNA5SP22-201ENST00000365393 109 ntBASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 ENSAP1-201ENST00000392855 326 ntBASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 RN7SKP182-201ENST00000410772 298 ntBASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 RPS20P25-201ENST00000412447 352 ntBASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 BMS1P19-201ENST00000433925 393 ntBASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 ELOCP18-201ENST00000434209 337 ntBASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 CEACAMP1-201ENST00000434624 1035 ntBASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 UBE2V1P3-201ENST00000439651 417 ntBASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 HMGB3P22-202ENST00000451823 572 ntBASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 RPL23AP81-201ENST00000455252 467 ntBASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC107015.1-201ENST00000466902 747 ntBASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 CCDC75P1-201ENST00000469247 791 ntBASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 RN7SL691P-201ENST00000494487 301 ntBASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 AP002812.1-201ENST00000495378 474 ntBASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 MTND4LP31-201ENST00000514859 294 ntBASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC105233.3-201ENST00000531125 744 ntBASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC107918.3-201ENST00000533272 382 ntBASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC034105.4-201ENST00000568304 277 ntBASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 OR1AB1P-201ENST00000585564 761 ntBASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 AL138721.1-201ENST00000616756 179 ntBASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.15□□□□□ -1.75
TMX2-CTNND1H3BSU7 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 MTND5P23-201ENST00000430812 1655 ntBASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC240504.1-201ENST00000395709 845 ntBASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 RPS27AP11-201ENST00000402798 447 ntBASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 RPS20P14-201ENST00000412545 360 ntBASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 AL590806.1-201ENST00000415818 853 ntBASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 AL139095.3-201ENST00000419672 1203 ntBASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 AL157831.1-201ENST00000426134 473 ntBASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 COX6B1P7-201ENST00000430845 235 ntBASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC013410.1-201ENST00000436223 1232 ntBASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 AL133477.1-201ENST00000457472 514 ntBASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 AP000926.3-201ENST00000497201 299 ntBASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC020593.1-201ENST00000507399 299 ntBASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC006499.6-201ENST00000511169 607 ntBASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 OR5BC1P-201ENST00000529327 739 ntBASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.14□□□□□ -1.75
TMX2-CTNND1H3BSU7 AL161729.3-201ENST00000603533 673 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms