Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL110118.1-201ENST00000553543 400 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 RN7SL690P-201ENST00000582087 240 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 RN7SL622P-201ENST00000585292 275 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 AC096586.1-201ENST00000610267 561 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 FRG1HP-204ENST00000617940 757 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 MIR6758-201ENST00000620653 63 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 AC024595.1-201ENST00000623088 387 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 AC015908.5-201ENST00000623289 343 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 DDX18P3-201ENST00000404856 2007 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 DHX40P1-201ENST00000588725 1412 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 CASC19-206ENST00000641028 1430 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 AL132640.2-201ENST00000559968 1698 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 AP001642.1-201ENST00000624727 2117 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 AL353743.4-201ENST00000422653 1547 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 HSPA8P19-201ENST00000505359 1517 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 KARSP3-201ENST00000571212 1504 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 RPL32P3-201ENST00000359025 275 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 AL355143.1-201ENST00000407101 841 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 GSTM3P2-201ENST00000412746 530 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 AC004938.1-201ENST00000438468 308 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 GEMIN8P3-201ENST00000445417 720 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 AC068135.1-201ENST00000446164 246 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 GXYLT1P1-201ENST00000446657 490 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 TPT1P12-201ENST00000448968 492 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 MTND2P28-201ENST00000457540 1044 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 TPT1P1-201ENST00000458495 518 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 PPIAP21-201ENST00000464473 501 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 OR52A4P-201ENST00000472867 958 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 AC008565.1-201ENST00000509046 885 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 AC087477.6-201ENST00000559595 843 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 MTND4LP24-201ENST00000572277 291 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 RN7SL652P-201ENST00000577769 300 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 MIR4284-201ENST00000578924 81 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 AC110743.1-201ENST00000584870 478 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 OR7A19P-201ENST00000608051 733 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 STMN1P1-201ENST00000617809 440 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 AC009704.2-201ENST00000618739 483 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 AL023881.1-201ENST00000621088 301 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 CR392039.4-201ENST00000624968 501 ntBASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.28□□□□□ -1.72
NPIPA3F8WFD2 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
NPIPA3F8WFD2 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.27□□□□□ -1.73
NPIPA3F8WFD2 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.27□□□□□ -1.73
NPIPA3F8WFD2 AL731532.2-201ENST00000623542 1953 ntBASIC4.27□□□□□ -1.73
NPIPA3F8WFD2 SEC63P2-201ENST00000503863 1939 ntBASIC4.27□□□□□ -1.73
NPIPA3F8WFD2 AC009229.4-201ENST00000623854 1947 ntBASIC4.27□□□□□ -1.73
NPIPA3F8WFD2 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
NPIPA3F8WFD2 AC100871.1-201ENST00000507871 1456 ntBASIC4.27□□□□□ -1.73
NPIPA3F8WFD2 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
NPIPA3F8WFD2 SNORA70F-201ENST00000384142 135 ntBASIC4.27□□□□□ -1.73
NPIPA3F8WFD2 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NPIPA3F8WFD2 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
NPIPA3F8WFD2 MTATP6P31-201ENST00000406985 692 ntBASIC4.27□□□□□ -1.73
NPIPA3F8WFD2 U3.35-201ENST00000408405 208 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms