Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 MYL12BP2-201ENST00000503948 512 ntBASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 SLC25A15P5-201ENST00000508033 253 ntBASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 AC027338.1-201ENST00000514840 825 ntBASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 SNORA76.2-201ENST00000517095 137 ntBASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 HMGB1P19-201ENST00000517578 577 ntBASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 AL049839.1-201ENST00000556151 657 ntBASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 RN7SL652P-201ENST00000577769 300 ntBASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 SNORA74C-1-201ENST00000580726 201 ntBASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 AC093227.2-201ENST00000589357 285 ntBASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 AP005019.3-201ENST00000620418 560 ntBASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 AL023881.1-201ENST00000621088 301 ntBASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 AC011815.3-201ENST00000624194 473 ntBASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 AP003072.4-201ENST00000624580 310 ntBASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 AC097372.4-201ENST00000625025 466 ntBASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 AC083865.1-201ENST00000636634 831 ntBASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 AL731566.1-201ENST00000620490 1937 ntBASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 AC006971.1-201ENST00000407916 4486 ntBASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 OR6C69P-201ENST00000394268 893 ntBASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 HSPD1P16-201ENST00000402302 394 ntBASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AL133268.1-201ENST00000405676 1401 ntBASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AL591848.1-201ENST00000413092 322 ntBASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AC140479.3-201ENST00000418944 1126 ntBASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 CYCSP24-201ENST00000445119 316 ntBASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 ZNF137P-201ENST00000456718 1920 ntBASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 RN7SL517P-201ENST00000462240 305 ntBASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AC113430.1-201ENST00000506872 718 ntBASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AC091868.1-201ENST00000508746 304 ntBASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 MTND5P11-201ENST00000511037 1812 ntBASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 RNU6-1102P-201ENST00000516149 96 ntBASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AC068831.4-201ENST00000556118 109 ntBASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 MTND4LP25-201ENST00000570218 163 ntBASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AC022884.2-201ENST00000578535 580 ntBASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AC115085.1-201ENST00000588924 229 ntBASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 ZNF92P2-201ENST00000600543 1059 ntBASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AL109618.2-201ENST00000605527 211 ntBASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 AL445493.3-201ENST00000619568 477 ntBASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 CDRT1-208ENST00000630868 794 ntBASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 OR14L1P-202ENST00000641545 3009 ntBASIC4.59□□□□□ -1.67
PCDHGA1Q9Y5H4 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PCDHGA1Q9Y5H4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
PCDHGA1Q9Y5H4 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.59□□□□□ -1.68
PCDHGA1Q9Y5H4 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.59□□□□□ -1.68
PCDHGA1Q9Y5H4 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 AC017079.1-201ENST00000333650 415 ntBASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 RNU1-85P-201ENST00000364127 164 ntBASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 RNA5SP515-201ENST00000364570 118 ntBASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 SNORA71.2-201ENST00000364941 134 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms