Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 DYNLL1P7-201ENST00000429273 258 ntBASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 CEACAMP7-201ENST00000444105 496 ntBASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 AC016772.1-201ENST00000444170 1261 ntBASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 Z80107.2-201ENST00000445127 392 ntBASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 MTCO2P7-201ENST00000446518 666 ntBASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 MTND1P16-201ENST00000465177 898 ntBASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 RPL30P6-201ENST00000475925 342 ntBASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 ACTG1P13-201ENST00000486987 1043 ntBASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 RPS27P23-201ENST00000487608 251 ntBASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 RPS24P16-201ENST00000497294 392 ntBASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 OR1F2P-201ENST00000570470 933 ntBASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 AL390816.3-201ENST00000604527 1066 ntBASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 AC234782.5-201ENST00000617723 324 ntBASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 AC124312.6-202ENST00000623624 418 ntBASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 AP001784.1-201ENST00000624107 428 ntBASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 AC135068.5-201ENST00000624197 983 ntBASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 AC098679.4-201ENST00000624241 654 ntBASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 AC109315.1-201ENST00000584143 1347 ntBASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 RNU6-621P-201ENST00000364752 109 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 RNU6-1200P-201ENST00000384162 107 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 SNORA48.4-201ENST00000391089 134 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 DBIP1-201ENST00000401435 260 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 RNU6-272P-201ENST00000411028 104 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AL161449.1-201ENST00000414531 1199 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AC234782.4-201ENST00000417646 1048 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AC019178.2-201ENST00000423595 505 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AL035407.1-201ENST00000429211 571 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AL050321.1-201ENST00000432363 400 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AL591503.2-201ENST00000442314 1005 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AC105399.1-202ENST00000447303 205 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 RPS27AP8-201ENST00000452665 445 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AC005229.2-201ENST00000456995 399 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AC092754.1-201ENST00000472975 479 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 RN7SL97P-201ENST00000486780 299 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 OR2A20P-203ENST00000498397 1268 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 RNA5SP228-201ENST00000516232 133 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 RN7SKP66-201ENST00000516681 231 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 RNU6-759P-201ENST00000516740 103 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 HIGD1AP6-201ENST00000521833 279 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AC022832.1-201ENST00000530718 645 ntBASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PCDHB1Q9Y5F3 AC004217.3-201ENST00000551552 878 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms