Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
PCDHB4Q9Y5E5 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB4Q9Y5E5 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PCDHB4Q9Y5E5 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB4Q9Y5E5 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB4Q9Y5E5 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
PCDHB4Q9Y5E5 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB4Q9Y5E5 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 RN7SKP145-201ENST00000363291 303 ntBASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 RNU6-666P-201ENST00000363499 107 ntBASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 RNU4-7P-201ENST00000364758 141 ntBASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 RNY3P10-201ENST00000384764 102 ntBASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 PPIAP9-201ENST00000403866 498 ntBASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 RNA5SP178-201ENST00000410380 128 ntBASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 MTND1P21-201ENST00000412991 285 ntBASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 Z93019.1-201ENST00000416450 973 ntBASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 RPS27AP7-201ENST00000422792 455 ntBASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 AC104651.1-201ENST00000427559 735 ntBASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 AC010975.2-201ENST00000427781 588 ntBASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 SEPT7P5-201ENST00000434048 306 ntBASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 RPS25P9-201ENST00000435591 252 ntBASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 AC126182.1-201ENST00000478134 357 ntBASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 RN7SL273P-201ENST00000481561 299 ntBASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 AC104687.1-201ENST00000485829 412 ntBASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 SUMO2P4-201ENST00000504193 276 ntBASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 AC006499.5-201ENST00000505037 514 ntBASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 AC090071.1-201ENST00000507713 644 ntBASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 CBX3P7-201ENST00000532876 502 ntBASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 AC104695.2-201ENST00000605056 775 ntBASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 AC005962.2-201ENST00000611427 652 ntBASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 AL008636.1-201ENST00000625038 1018 ntBASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 AC016745.2-201ENST00000608834 3443 ntBASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 AC004158.1-201ENST00000564508 4319 ntBASIC5.85□□□□□ -1.47
PCDHB4Q9Y5E5 Z99496.1-201ENST00000469424 1477 ntBASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 SNORA17A-201ENST00000391185 133 ntBASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 SNORA11C-201ENST00000408532 129 ntBASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 RN7SKP33-201ENST00000410942 340 ntBASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 PIGPP2-201ENST00000411569 458 ntBASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 MED28P3-201ENST00000444288 531 ntBASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 PNPLA4P1-201ENST00000458328 305 ntBASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 RPS4XP12-201ENST00000461747 709 ntBASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 AC098583.1-201ENST00000480875 255 ntBASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 MTND6P2-201ENST00000512226 524 ntBASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 AP003392.2-201ENST00000527269 208 ntBASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 AP002812.4-201ENST00000532139 286 ntBASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB4Q9Y5E5 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms