Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.91□□□□□ -1.62
PKP3Q9Y446 TBCAP2-201ENST00000416175 326 ntBASIC4.91□□□□□ -1.62
PKP3Q9Y446 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.91□□□□□ -1.62
PKP3Q9Y446 AC027644.1-201ENST00000419595 298 ntBASIC4.91□□□□□ -1.62
PKP3Q9Y446 RPF2P1-201ENST00000424137 906 ntBASIC4.91□□□□□ -1.62
PKP3Q9Y446 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.91□□□□□ -1.62
PKP3Q9Y446 RPL7P34-201ENST00000433316 712 ntBASIC4.91□□□□□ -1.62
PKP3Q9Y446 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.91□□□□□ -1.62
PKP3Q9Y446 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PKP3Q9Y446 SLC25A18P1-201ENST00000449385 454 ntBASIC4.91□□□□□ -1.62
PKP3Q9Y446 AL935212.3-201ENST00000450729 284 ntBASIC4.91□□□□□ -1.62
PKP3Q9Y446 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.91□□□□□ -1.62
PKP3Q9Y446 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.91□□□□□ -1.62
PKP3Q9Y446 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PKP3Q9Y446 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.91□□□□□ -1.62
PKP3Q9Y446 AC092593.2-201ENST00000513866 913 ntBASIC4.91□□□□□ -1.62
PKP3Q9Y446 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.91□□□□□ -1.62
PKP3Q9Y446 FTH1P11-201ENST00000517577 551 ntBASIC4.91□□□□□ -1.62
PKP3Q9Y446 MRPS36P3-201ENST00000519284 130 ntBASIC4.91□□□□□ -1.62
PKP3Q9Y446 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.91□□□□□ -1.62
PKP3Q9Y446 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.91□□□□□ -1.62
PKP3Q9Y446 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PKP3Q9Y446 MTCO2P15-201ENST00000532655 656 ntBASIC4.91□□□□□ -1.62
PKP3Q9Y446 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.91□□□□□ -1.62
PKP3Q9Y446 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.91□□□□□ -1.62
PKP3Q9Y446 SNORA74C-1-201ENST00000580726 201 ntBASIC4.91□□□□□ -1.62
PKP3Q9Y446 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.91□□□□□ -1.62
PKP3Q9Y446 AC069366.1-201ENST00000583159 838 ntBASIC4.91□□□□□ -1.62
PKP3Q9Y446 AC015688.2-201ENST00000584523 262 ntBASIC4.91□□□□□ -1.62
PKP3Q9Y446 VN1R83P-201ENST00000595685 445 ntBASIC4.91□□□□□ -1.62
PKP3Q9Y446 AC021749.1-201ENST00000604322 607 ntBASIC4.91□□□□□ -1.62
PKP3Q9Y446 AC092954.1-201ENST00000609121 445 ntBASIC4.91□□□□□ -1.62
PKP3Q9Y446 AL121890.2-201ENST00000617644 465 ntBASIC4.91□□□□□ -1.62
PKP3Q9Y446 AP003485.2-201ENST00000623636 610 ntBASIC4.91□□□□□ -1.62
PKP3Q9Y446 AC112694.2-201ENST00000623697 768 ntBASIC4.91□□□□□ -1.62
PKP3Q9Y446 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.91□□□□□ -1.62
PKP3Q9Y446 ZNF876P-202ENST00000398732 1485 ntBASIC4.91□□□□□ -1.62
PKP3Q9Y446 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PKP3Q9Y446 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PKP3Q9Y446 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
PKP3Q9Y446 RNF6P1-201ENST00000444889 1784 ntBASIC4.91□□□□□ -1.62
PKP3Q9Y446 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PKP3Q9Y446 AC005261.4-201ENST00000600047 1385 ntBASIC4.91□□□□□ -1.62
PKP3Q9Y446 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PKP3Q9Y446 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PKP3Q9Y446 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PKP3Q9Y446 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.9□□□□□ -1.62
PKP3Q9Y446 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.9□□□□□ -1.62
PKP3Q9Y446 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.9□□□□□ -1.62
PKP3Q9Y446 INTS6P1-201ENST00000504674 2530 ntBASIC4.9□□□□□ -1.62
PKP3Q9Y446 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PKP3Q9Y446 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PKP3Q9Y446 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PKP3Q9Y446 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PKP3Q9Y446 RNA5SP123-201ENST00000363244 119 ntBASIC4.9□□□□□ -1.63
PKP3Q9Y446 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PKP3Q9Y446 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 AL590290.1-201ENST00000405336 380 ntBASIC4.9□□□□□ -1.63
PKP3Q9Y446 SNORA11C-201ENST00000408532 129 ntBASIC4.9□□□□□ -1.63
PKP3Q9Y446 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 OR4K6P-201ENST00000416478 897 ntBASIC4.9□□□□□ -1.63
PKP3Q9Y446 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PKP3Q9Y446 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
PKP3Q9Y446 HMGB1P45-201ENST00000435986 653 ntBASIC4.9□□□□□ -1.63
PKP3Q9Y446 RPL7P11-201ENST00000437586 658 ntBASIC4.9□□□□□ -1.63
PKP3Q9Y446 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 PTMAP6-201ENST00000439110 327 ntBASIC4.9□□□□□ -1.63
PKP3Q9Y446 AC112498.1-201ENST00000444401 332 ntBASIC4.9□□□□□ -1.63
PKP3Q9Y446 AL591363.1-201ENST00000450091 483 ntBASIC4.9□□□□□ -1.63
PKP3Q9Y446 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 RPL7AP52-201ENST00000458096 790 ntBASIC4.9□□□□□ -1.63
PKP3Q9Y446 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PKP3Q9Y446 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PKP3Q9Y446 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 MRPS33P2-201ENST00000507850 322 ntBASIC4.9□□□□□ -1.63
PKP3Q9Y446 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 EDDM3DP-201ENST00000554692 434 ntBASIC4.9□□□□□ -1.63
PKP3Q9Y446 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 AC091057.2-201ENST00000602594 792 ntBASIC4.9□□□□□ -1.63
PKP3Q9Y446 AC092106.3-201ENST00000611308 722 ntBASIC4.9□□□□□ -1.63
PKP3Q9Y446 AC024257.5-201ENST00000612739 531 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms