Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 OR51K1P-201ENST00000510214 950 ntBASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 PPBPP1-201ENST00000510807 373 ntBASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 IGKV1-32-201ENST00000519290 311 ntBASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 AC090281.1-201ENST00000523019 276 ntBASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 AC007424.1-203ENST00000554613 687 ntBASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 MIR4270-201ENST00000581799 70 ntBASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 BPIFA4P-203ENST00000603168 689 ntBASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 AC084036.1-201ENST00000609190 508 ntBASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 AL049539.1-201ENST00000611964 459 ntBASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 AL121873.1-201ENST00000616013 524 ntBASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 MIR6891-201ENST00000618788 93 ntBASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 LINC00622-201ENST00000562811 1570 ntBASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RHBDD3Q9Y3P4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 MIR659-201ENST00000384963 97 ntBASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 SDHCP2-201ENST00000398565 501 ntBASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 RPL31P45-201ENST00000419532 356 ntBASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 AL049745.1-201ENST00000433953 286 ntBASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 AL353093.1-201ENST00000441292 436 ntBASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 RPL34P26-201ENST00000445636 354 ntBASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 AC012671.1-201ENST00000451912 203 ntBASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 CEACAMP6-201ENST00000452007 574 ntBASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 SNRPGP5-201ENST00000456003 220 ntBASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 AC074029.2-201ENST00000551045 634 ntBASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 AC009268.1-201ENST00000561352 1203 ntBASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 AL139286.1-201ENST00000604465 483 ntBASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 AC012557.1-201ENST00000607115 611 ntBASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 SNX18P1Y-201ENST00000616231 511 ntBASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 LINC01808-202ENST00000641680 1116 ntBASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 Z98755.1-201ENST00000407015 1384 ntBASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.87□□□□□ -1.79
RHBDD3Q9Y3P4 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AC095050.2-201ENST00000510748 1458 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 RN7SKP103-201ENST00000363848 320 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 MIR124-3-201ENST00000384866 87 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 RNA5SP397-201ENST00000391323 118 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AL035419.1-201ENST00000397037 564 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AL590290.1-201ENST00000405336 380 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AMZ2P2-201ENST00000406819 1057 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 MTND2P15-201ENST00000418575 892 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AL356806.1-201ENST00000422524 916 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 ELOCP6-201ENST00000429066 328 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 USP9YP9-201ENST00000429406 715 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 HLA-N-201ENST00000437516 135 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AC006466.1-201ENST00000438721 289 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AC245517.2-201ENST00000442890 346 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 RAD1P2-201ENST00000446414 663 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 ELOCP12-201ENST00000458706 328 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 SNORD108-201ENST00000459332 71 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AP001781.1-201ENST00000530977 207 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AC023158.1-201ENST00000561632 1025 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms