Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 RNU6-236P-201ENST00000363886 106 ntBASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 RNA5SP428-201ENST00000365129 132 ntBASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 SNORA70-201ENST00000384436 135 ntBASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 RNU4-22P-201ENST00000411058 166 ntBASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 AC107081.1-201ENST00000414975 361 ntBASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 USP9YP24-201ENST00000434374 697 ntBASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 AL627308.1-201ENST00000435693 821 ntBASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 ELOCP10-201ENST00000440624 327 ntBASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 AL357520.1-201ENST00000441557 453 ntBASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 USP9YP17-201ENST00000444617 696 ntBASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 SEPT14P24-201ENST00000447236 180 ntBASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 AC079841.1-201ENST00000481228 950 ntBASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 AC104971.1-201ENST00000495117 578 ntBASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 AC113430.1-201ENST00000506872 718 ntBASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 HIGD1AP18-201ENST00000520730 278 ntBASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 FKBP1BP1-201ENST00000553366 325 ntBASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 MIR1269B-201ENST00000580405 75 ntBASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 VN1R87P-201ENST00000596706 487 ntBASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 ELOCP34-201ENST00000604436 327 ntBASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 AC079610.2-201ENST00000604818 690 ntBASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 AL121932.1-201ENST00000605542 214 ntBASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 AL353600.1-201ENST00000608148 251 ntBASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 SDR42E1P1-201ENST00000611327 477 ntBASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 FRG1HP-204ENST00000617940 757 ntBASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MRPS28Q9Y2Q9 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 U6.112-201ENST00000384129 70 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 RNU6-1242P-201ENST00000391052 103 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 MCTS2P-201ENST00000394552 546 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 ARL4AP5-201ENST00000404372 599 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 U3.36-201ENST00000408418 213 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 RPL22P18-201ENST00000417197 377 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 MTCO2P21-201ENST00000419780 677 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 RPL12P28-201ENST00000430852 489 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 RPL7P34-201ENST00000433316 712 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 GTF2IP3-201ENST00000433887 494 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 PPIAP13-201ENST00000434706 478 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 VN1R25P-201ENST00000443385 738 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 RPS18P6-201ENST00000476880 458 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 TCP11X3P-202ENST00000514289 1254 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 RN7SKP141-201ENST00000516167 338 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 OR4U1P-201ENST00000554958 912 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 AC068446.3-201ENST00000555285 382 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 AL049870.4-201ENST00000555741 486 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 AC093249.4-201ENST00000564755 259 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms