Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC108467.2-201ENST00000617640 1597 ntBASIC4.28□□□□□ -1.72
NDE1Q9NXR1 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.28□□□□□ -1.72
NDE1Q9NXR1 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NDE1Q9NXR1 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.28□□□□□ -1.72
NDE1Q9NXR1 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
NDE1Q9NXR1 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
NDE1Q9NXR1 SNORA71.2-201ENST00000364941 134 ntBASIC4.28□□□□□ -1.72
NDE1Q9NXR1 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.28□□□□□ -1.72
NDE1Q9NXR1 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NDE1Q9NXR1 RNA5SP105-201ENST00000391123 113 ntBASIC4.28□□□□□ -1.72
NDE1Q9NXR1 AC104297.1-201ENST00000393779 870 ntBASIC4.28□□□□□ -1.72
NDE1Q9NXR1 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.28□□□□□ -1.72
NDE1Q9NXR1 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NDE1Q9NXR1 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.28□□□□□ -1.72
NDE1Q9NXR1 ELOCP6-201ENST00000429066 328 ntBASIC4.28□□□□□ -1.72
NDE1Q9NXR1 AL138787.1-202ENST00000437804 898 ntBASIC4.28□□□□□ -1.72
NDE1Q9NXR1 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.28□□□□□ -1.72
NDE1Q9NXR1 ELOCP12-201ENST00000458706 328 ntBASIC4.28□□□□□ -1.72
NDE1Q9NXR1 RPL32P14-201ENST00000463196 378 ntBASIC4.28□□□□□ -1.72
NDE1Q9NXR1 RN7SL717P-201ENST00000478343 297 ntBASIC4.28□□□□□ -1.72
NDE1Q9NXR1 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.28□□□□□ -1.72
NDE1Q9NXR1 SCARNA22-201ENST00000503991 125 ntBASIC4.28□□□□□ -1.72
NDE1Q9NXR1 AC004980.4-201ENST00000513375 203 ntBASIC4.28□□□□□ -1.72
NDE1Q9NXR1 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.28□□□□□ -1.72
NDE1Q9NXR1 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.28□□□□□ -1.72
NDE1Q9NXR1 IGLVIV-53-201ENST00000520107 367 ntBASIC4.28□□□□□ -1.72
NDE1Q9NXR1 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.28□□□□□ -1.72
NDE1Q9NXR1 AC022832.1-201ENST00000530718 645 ntBASIC4.28□□□□□ -1.72
NDE1Q9NXR1 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.28□□□□□ -1.72
NDE1Q9NXR1 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
NDE1Q9NXR1 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.28□□□□□ -1.72
NDE1Q9NXR1 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.28□□□□□ -1.72
NDE1Q9NXR1 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.28□□□□□ -1.72
NDE1Q9NXR1 AF230666.2-201ENST00000602328 725 ntBASIC4.28□□□□□ -1.72
NDE1Q9NXR1 AC013244.1-201ENST00000604279 193 ntBASIC4.28□□□□□ -1.72
NDE1Q9NXR1 AL158050.2-201ENST00000605336 568 ntBASIC4.28□□□□□ -1.72
NDE1Q9NXR1 AL135786.2-201ENST00000608422 615 ntBASIC4.28□□□□□ -1.72
NDE1Q9NXR1 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.28□□□□□ -1.72
NDE1Q9NXR1 EIF3FP1-201ENST00000613970 806 ntBASIC4.28□□□□□ -1.72
NDE1Q9NXR1 AC018926.1-201ENST00000616335 435 ntBASIC4.28□□□□□ -1.72
NDE1Q9NXR1 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.28□□□□□ -1.72
NDE1Q9NXR1 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NDE1Q9NXR1 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.28□□□□□ -1.72
NDE1Q9NXR1 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
NDE1Q9NXR1 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NDE1Q9NXR1 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.28□□□□□ -1.72
NDE1Q9NXR1 AC017007.4-201ENST00000503353 1352 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 CPHL1P-201ENST00000461341 3407 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 VPS35P1-201ENST00000563400 1518 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.27□□□□□ -1.73
NDE1Q9NXR1 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NDE1Q9NXR1 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
NDE1Q9NXR1 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NDE1Q9NXR1 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
NDE1Q9NXR1 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NDE1Q9NXR1 RNU6-1279P-201ENST00000383917 103 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 RNU6-796P-201ENST00000391086 107 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AL034403.1-201ENST00000399414 885 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 TAF9BP2-201ENST00000400856 499 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AL158050.1-201ENST00000416077 457 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AL353597.2-202ENST00000434901 373 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.27□□□□□ -1.73
NDE1Q9NXR1 MTCYBP29-201ENST00000436327 1006 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 PA2G4P6-201ENST00000438325 1197 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AL645931.1-201ENST00000439737 410 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.27□□□□□ -1.73
NDE1Q9NXR1 EIF4A1P11-201ENST00000451239 222 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 HMGB3P22-202ENST00000451823 572 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AC012671.1-201ENST00000451912 203 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 MTATP6P14-201ENST00000455189 673 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AC092691.2-201ENST00000461787 803 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AC090114.3-201ENST00000479267 829 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AP003355.1-201ENST00000518956 587 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AC020914.4-201ENST00000597690 277 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AC005034.4-201ENST00000603612 899 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AC005156.1-201ENST00000613371 573 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AC004477.3-201ENST00000614061 590 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AC022960.3-201ENST00000619794 441 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AC068880.4-201ENST00000623082 495 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AP006248.2-201ENST00000623309 592 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AC010608.3-201ENST00000625048 527 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 MIR6715B-201ENST00000637172 77 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AC099654.8-201ENST00000637757 681 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AL049767.1-202ENST00000637826 242 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NDE1Q9NXR1 AL031985.3-201ENST00000565390 2449 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NDE1Q9NXR1 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
NDE1Q9NXR1 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NDE1Q9NXR1 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms