Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC018926.3-201ENST00000618841 406 ntBASIC5.14□□□□□ -1.59
BLOC1S4Q9NUP1 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
BLOC1S4Q9NUP1 AC005086.4-201ENST00000623065 213 ntBASIC5.14□□□□□ -1.59
BLOC1S4Q9NUP1 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.14□□□□□ -1.59
BLOC1S4Q9NUP1 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
BLOC1S4Q9NUP1 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
BLOC1S4Q9NUP1 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 AL512646.1-201ENST00000269395 1077 ntBASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 AL133270.1-201ENST00000402635 279 ntBASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 RN7SKP106-201ENST00000410832 272 ntBASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 RPL7P4-203ENST00000430239 730 ntBASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 RPS26P40-201ENST00000435209 294 ntBASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 RPL7P33-201ENST00000444159 742 ntBASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 AC010326.1-201ENST00000462726 602 ntBASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 AC092905.1-201ENST00000467527 949 ntBASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 AC006967.1-201ENST00000467608 589 ntBASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 AC104689.1-201ENST00000473356 768 ntBASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 AC104763.1-201ENST00000475274 360 ntBASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 AC008494.2-201ENST00000514544 370 ntBASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 AC020978.9-201ENST00000624380 1141 ntBASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
BLOC1S4Q9NUP1 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 GCNT6-201ENST00000379591 934 ntBASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 SNORA70F-201ENST00000384142 135 ntBASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 RPL21P91-201ENST00000429231 479 ntBASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 YWHAEP5-201ENST00000431545 765 ntBASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 RPL7P31-201ENST00000450192 724 ntBASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 AL645937.3-201ENST00000453647 936 ntBASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 BX248409.1-201ENST00000455497 255 ntBASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 RPS4XP6-201ENST00000477670 797 ntBASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 AF186190.1-201ENST00000517470 480 ntBASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 AP003355.1-201ENST00000518956 587 ntBASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 AC124293.1-201ENST00000530034 493 ntBASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 AL442163.2-201ENST00000553912 710 ntBASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 DPRXP4-201ENST00000578053 568 ntBASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 DNAJC19P3-201ENST00000594491 331 ntBASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 AC090181.2-201ENST00000602975 672 ntBASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 AC023762.1-201ENST00000603280 584 ntBASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 MIR6780A-201ENST00000615089 68 ntBASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 AL121890.3-201ENST00000618494 516 ntBASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 ZNF137P-201ENST00000456718 1920 ntBASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 MFSD8-216ENST00000641147 4009 ntBASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms