Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 GTF2IP2-201ENST00000424290 697 ntBASIC4.13□□□□□ -1.75
TREX1Q9NSU2 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 RPL23AP4-201ENST00000427757 463 ntBASIC4.13□□□□□ -1.75
TREX1Q9NSU2 MTCO1P54-201ENST00000430139 712 ntBASIC4.13□□□□□ -1.75
TREX1Q9NSU2 COX6B1P7-201ENST00000430845 235 ntBASIC4.13□□□□□ -1.75
TREX1Q9NSU2 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 AC006011.1-201ENST00000442758 349 ntBASIC4.13□□□□□ -1.75
TREX1Q9NSU2 CEACAMP9-201ENST00000442990 513 ntBASIC4.13□□□□□ -1.75
TREX1Q9NSU2 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 OR6C72P-201ENST00000451403 892 ntBASIC4.13□□□□□ -1.75
TREX1Q9NSU2 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 AC108475.1-201ENST00000507880 950 ntBASIC4.13□□□□□ -1.75
TREX1Q9NSU2 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 RNU7-143P-201ENST00000516781 65 ntBASIC4.13□□□□□ -1.75
TREX1Q9NSU2 IGKV2-38-201ENST00000517443 247 ntBASIC4.13□□□□□ -1.75
TREX1Q9NSU2 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 AC079171.1-201ENST00000568788 914 ntBASIC4.13□□□□□ -1.75
TREX1Q9NSU2 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 MIR4277-201ENST00000578298 84 ntBASIC4.13□□□□□ -1.75
TREX1Q9NSU2 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 AC068020.1-201ENST00000594215 661 ntBASIC4.13□□□□□ -1.75
TREX1Q9NSU2 AC104785.1-201ENST00000603220 588 ntBASIC4.13□□□□□ -1.75
TREX1Q9NSU2 AC090953.1-201ENST00000604305 1092 ntBASIC4.13□□□□□ -1.75
TREX1Q9NSU2 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 MIR3653-201ENST00000625572 110 ntBASIC4.13□□□□□ -1.75
TREX1Q9NSU2 AC116667.1-201ENST00000604855 2072 ntBASIC4.13□□□□□ -1.75
TREX1Q9NSU2 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 CCT8P1-201ENST00000413611 1657 ntBASIC4.13□□□□□ -1.75
TREX1Q9NSU2 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 ZNF962P-201ENST00000443465 3140 ntBASIC4.12□□□□□ -1.75
TREX1Q9NSU2 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 RNU1-32P-201ENST00000363937 159 ntBASIC4.12□□□□□ -1.75
TREX1Q9NSU2 RNA5SP513-201ENST00000364648 118 ntBASIC4.12□□□□□ -1.75
TREX1Q9NSU2 RNU4-25P-201ENST00000410569 230 ntBASIC4.12□□□□□ -1.75
TREX1Q9NSU2 RNA5SP306-201ENST00000411087 107 ntBASIC4.12□□□□□ -1.75
TREX1Q9NSU2 RPL23AP26-201ENST00000412728 464 ntBASIC4.12□□□□□ -1.75
TREX1Q9NSU2 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 AC009480.2-201ENST00000422916 432 ntBASIC4.12□□□□□ -1.75
TREX1Q9NSU2 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 AC093084.1-201ENST00000424233 687 ntBASIC4.12□□□□□ -1.75
TREX1Q9NSU2 DNAJC19P7-201ENST00000428811 344 ntBASIC4.12□□□□□ -1.75
TREX1Q9NSU2 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 FGF7P3-201ENST00000454645 303 ntBASIC4.12□□□□□ -1.75
TREX1Q9NSU2 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 RPL7AP52-201ENST00000458096 790 ntBASIC4.12□□□□□ -1.75
TREX1Q9NSU2 RN7SL481P-201ENST00000477764 299 ntBASIC4.12□□□□□ -1.75
TREX1Q9NSU2 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 AC068714.1-201ENST00000559623 800 ntBASIC4.12□□□□□ -1.75
TREX1Q9NSU2 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 RPL23AP87-202ENST00000573039 466 ntBASIC4.12□□□□□ -1.75
TREX1Q9NSU2 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 AL139395.1-201ENST00000603662 160 ntBASIC4.12□□□□□ -1.75
TREX1Q9NSU2 AC104662.1-201ENST00000604448 511 ntBASIC4.12□□□□□ -1.75
TREX1Q9NSU2 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 AC134882.1-201ENST00000603738 1676 ntBASIC4.12□□□□□ -1.75
TREX1Q9NSU2 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 LARP1BP1-201ENST00000506036 1359 ntBASIC4.12□□□□□ -1.75
TREX1Q9NSU2 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TREX1Q9NSU2 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.11□□□□□ -1.75
TREX1Q9NSU2 AC009951.1-201ENST00000623674 2614 ntBASIC4.11□□□□□ -1.75
TREX1Q9NSU2 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TREX1Q9NSU2 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TREX1Q9NSU2 AC110792.3-201ENST00000595906 1614 ntBASIC4.11□□□□□ -1.75
TREX1Q9NSU2 AC022893.2-201ENST00000564832 3296 ntBASIC4.11□□□□□ -1.75
TREX1Q9NSU2 RNA5SP502-201ENST00000362694 119 ntBASIC4.11□□□□□ -1.75
TREX1Q9NSU2 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TREX1Q9NSU2 AL035696.2-201ENST00000407941 709 ntBASIC4.11□□□□□ -1.75
TREX1Q9NSU2 SNORA3C-201ENST00000408792 125 ntBASIC4.11□□□□□ -1.75
TREX1Q9NSU2 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TREX1Q9NSU2 AL358472.1-201ENST00000431295 329 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms