Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CISHQ9NSE2 RPS4XP15-201ENST00000489210 795 ntBASIC4.23□□□□□ -1.73
CISHQ9NSE2 PRELID3BP5-201ENST00000508612 460 ntBASIC4.23□□□□□ -1.73
CISHQ9NSE2 MIR2116-201ENST00000517221 80 ntBASIC4.23□□□□□ -1.73
CISHQ9NSE2 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.23□□□□□ -1.73
CISHQ9NSE2 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.23□□□□□ -1.73
CISHQ9NSE2 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.23□□□□□ -1.73
CISHQ9NSE2 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.23□□□□□ -1.73
CISHQ9NSE2 SULT1C2P2-201ENST00000562517 294 ntBASIC4.23□□□□□ -1.73
CISHQ9NSE2 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CISHQ9NSE2 SNX6P1-201ENST00000601728 1224 ntBASIC4.23□□□□□ -1.73
CISHQ9NSE2 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.23□□□□□ -1.73
CISHQ9NSE2 AC092653.1-201ENST00000608509 531 ntBASIC4.23□□□□□ -1.73
CISHQ9NSE2 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.23□□□□□ -1.73
CISHQ9NSE2 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CISHQ9NSE2 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CISHQ9NSE2 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.23□□□□□ -1.73
CISHQ9NSE2 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.23□□□□□ -1.73
CISHQ9NSE2 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CISHQ9NSE2 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CISHQ9NSE2 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CISHQ9NSE2 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.22□□□□□ -1.73
CISHQ9NSE2 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CISHQ9NSE2 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.22□□□□□ -1.73
CISHQ9NSE2 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.22□□□□□ -1.73
CISHQ9NSE2 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.22□□□□□ -1.73
CISHQ9NSE2 MIR448-201ENST00000362131 111 ntBASIC4.22□□□□□ -1.73
CISHQ9NSE2 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.22□□□□□ -1.73
CISHQ9NSE2 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CISHQ9NSE2 BMS1P3-201ENST00000372011 932 ntBASIC4.22□□□□□ -1.73
CISHQ9NSE2 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CISHQ9NSE2 AL160275.2-201ENST00000412010 394 ntBASIC4.22□□□□□ -1.73
CISHQ9NSE2 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.22□□□□□ -1.73
CISHQ9NSE2 HMGB1P37-201ENST00000439613 609 ntBASIC4.22□□□□□ -1.73
CISHQ9NSE2 SNRPFP2-201ENST00000440710 251 ntBASIC4.22□□□□□ -1.73
CISHQ9NSE2 AC239798.3-201ENST00000454459 408 ntBASIC4.22□□□□□ -1.73
CISHQ9NSE2 AC025445.1-201ENST00000502728 300 ntBASIC4.22□□□□□ -1.73
CISHQ9NSE2 MYL12AP1-201ENST00000518490 515 ntBASIC4.22□□□□□ -1.73
CISHQ9NSE2 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.22□□□□□ -1.73
CISHQ9NSE2 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.22□□□□□ -1.73
CISHQ9NSE2 AC008638.3-201ENST00000603341 463 ntBASIC4.22□□□□□ -1.73
CISHQ9NSE2 AC090948.2-201ENST00000607363 564 ntBASIC4.22□□□□□ -1.73
CISHQ9NSE2 AC244517.3-201ENST00000616254 1235 ntBASIC4.22□□□□□ -1.73
CISHQ9NSE2 AL591424.2-201ENST00000617023 128 ntBASIC4.22□□□□□ -1.73
CISHQ9NSE2 MIR6500-201ENST00000622700 86 ntBASIC4.22□□□□□ -1.73
CISHQ9NSE2 AC016717.3-201ENST00000624730 554 ntBASIC4.22□□□□□ -1.73
CISHQ9NSE2 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CISHQ9NSE2 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CISHQ9NSE2 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.22□□□□□ -1.73
CISHQ9NSE2 AP002001.2-201ENST00000529025 1469 ntBASIC4.22□□□□□ -1.73
CISHQ9NSE2 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CISHQ9NSE2 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CISHQ9NSE2 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CISHQ9NSE2 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CISHQ9NSE2 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CISHQ9NSE2 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
CISHQ9NSE2 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CISHQ9NSE2 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.73
CISHQ9NSE2 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.73
CISHQ9NSE2 MFSD8-220ENST00000641243 1422 ntBASIC4.21□□□□□ -1.73
CISHQ9NSE2 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
CISHQ9NSE2 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.21□□□□□ -1.73
CISHQ9NSE2 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CISHQ9NSE2 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.21□□□□□ -1.74
CISHQ9NSE2 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CISHQ9NSE2 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.21□□□□□ -1.74
CISHQ9NSE2 RNA5SP104-201ENST00000410989 118 ntBASIC4.21□□□□□ -1.74
CISHQ9NSE2 JKAMPP1-201ENST00000413804 919 ntBASIC4.21□□□□□ -1.74
CISHQ9NSE2 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.21□□□□□ -1.74
CISHQ9NSE2 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.21□□□□□ -1.74
CISHQ9NSE2 GSTA7P-201ENST00000438425 448 ntBASIC4.21□□□□□ -1.74
CISHQ9NSE2 AL353748.1-201ENST00000440753 474 ntBASIC4.21□□□□□ -1.74
CISHQ9NSE2 RPL21P89-201ENST00000444021 467 ntBASIC4.21□□□□□ -1.74
CISHQ9NSE2 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.21□□□□□ -1.74
CISHQ9NSE2 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.21□□□□□ -1.74
CISHQ9NSE2 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.21□□□□□ -1.74
CISHQ9NSE2 TPT1P3-201ENST00000492841 512 ntBASIC4.21□□□□□ -1.74
CISHQ9NSE2 RPL7P24-201ENST00000493052 752 ntBASIC4.21□□□□□ -1.74
CISHQ9NSE2 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.21□□□□□ -1.74
CISHQ9NSE2 RN7SKP21-201ENST00000516503 220 ntBASIC4.21□□□□□ -1.74
CISHQ9NSE2 NDUFA5P2-201ENST00000519723 344 ntBASIC4.21□□□□□ -1.74
CISHQ9NSE2 AC087369.1-201ENST00000520775 996 ntBASIC4.21□□□□□ -1.74
CISHQ9NSE2 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.21□□□□□ -1.74
CISHQ9NSE2 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CISHQ9NSE2 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.21□□□□□ -1.74
CISHQ9NSE2 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CISHQ9NSE2 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.21□□□□□ -1.74
CISHQ9NSE2 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.21□□□□□ -1.74
CISHQ9NSE2 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.21□□□□□ -1.74
CISHQ9NSE2 AC067959.1-201ENST00000604334 379 ntBASIC4.21□□□□□ -1.74
CISHQ9NSE2 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.21□□□□□ -1.74
CISHQ9NSE2 AC068831.8-201ENST00000620171 435 ntBASIC4.21□□□□□ -1.74
CISHQ9NSE2 AL139089.1-201ENST00000620372 975 ntBASIC4.21□□□□□ -1.74
CISHQ9NSE2 AC068724.3-201ENST00000625906 87 ntBASIC4.21□□□□□ -1.74
CISHQ9NSE2 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CISHQ9NSE2 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.21□□□□□ -1.74
CISHQ9NSE2 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.21□□□□□ -1.74
CISHQ9NSE2 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CISHQ9NSE2 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CISHQ9NSE2 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms