Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 SNURFL-201ENST00000309296 343 ntBASIC5.14□□□□□ -1.59
USP29Q9HBJ7 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 FCF1P5-201ENST00000406490 482 ntBASIC5.14□□□□□ -1.59
USP29Q9HBJ7 RNA5SP498-201ENST00000411342 120 ntBASIC5.14□□□□□ -1.59
USP29Q9HBJ7 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 RAC1P8-201ENST00000427086 527 ntBASIC5.14□□□□□ -1.59
USP29Q9HBJ7 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 MOB1AP1-201ENST00000430903 535 ntBASIC5.14□□□□□ -1.59
USP29Q9HBJ7 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 CACYBPP1-201ENST00000438592 684 ntBASIC5.14□□□□□ -1.59
USP29Q9HBJ7 NPM1P33-201ENST00000438918 872 ntBASIC5.14□□□□□ -1.59
USP29Q9HBJ7 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 ARL5AP2-201ENST00000444698 533 ntBASIC5.14□□□□□ -1.59
USP29Q9HBJ7 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 IGHV5-78-201ENST00000450948 295 ntBASIC5.14□□□□□ -1.59
USP29Q9HBJ7 AL133244.1-201ENST00000456007 258 ntBASIC5.14□□□□□ -1.59
USP29Q9HBJ7 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 AC083982.1-201ENST00000485679 344 ntBASIC5.14□□□□□ -1.59
USP29Q9HBJ7 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 AC010350.1-201ENST00000504908 231 ntBASIC5.14□□□□□ -1.59
USP29Q9HBJ7 AC010486.3-201ENST00000511602 785 ntBASIC5.14□□□□□ -1.59
USP29Q9HBJ7 RNA5SP228-201ENST00000516232 133 ntBASIC5.14□□□□□ -1.59
USP29Q9HBJ7 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 AC083923.1-201ENST00000523708 376 ntBASIC5.14□□□□□ -1.59
USP29Q9HBJ7 OR5AZ1P-201ENST00000527448 943 ntBASIC5.14□□□□□ -1.59
USP29Q9HBJ7 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 AC090695.1-201ENST00000561269 1222 ntBASIC5.14□□□□□ -1.59
USP29Q9HBJ7 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 MIR4480-201ENST00000582492 71 ntBASIC5.14□□□□□ -1.59
USP29Q9HBJ7 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 VN1R83P-201ENST00000595685 445 ntBASIC5.14□□□□□ -1.59
USP29Q9HBJ7 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 AC105254.2-201ENST00000603636 436 ntBASIC5.14□□□□□ -1.59
USP29Q9HBJ7 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 STMN1P1-201ENST00000617809 440 ntBASIC5.14□□□□□ -1.59
USP29Q9HBJ7 AC015914.2-201ENST00000618167 288 ntBASIC5.14□□□□□ -1.59
USP29Q9HBJ7 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 AC145207.9-201ENST00000623802 325 ntBASIC5.14□□□□□ -1.59
USP29Q9HBJ7 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 SEC63P2-201ENST00000503863 1939 ntBASIC5.14□□□□□ -1.59
USP29Q9HBJ7 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 AC104446.1-201ENST00000613728 1321 ntBASIC5.14□□□□□ -1.59
USP29Q9HBJ7 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.14□□□□□ -1.59
USP29Q9HBJ7 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 RNU6-83P-201ENST00000384568 112 ntBASIC5.13□□□□□ -1.59
USP29Q9HBJ7 ERHP2-201ENST00000402323 299 ntBASIC5.13□□□□□ -1.59
USP29Q9HBJ7 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 AL035551.1-201ENST00000446931 348 ntBASIC5.13□□□□□ -1.59
USP29Q9HBJ7 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 TCEA1P1-201ENST00000449716 880 ntBASIC5.13□□□□□ -1.59
USP29Q9HBJ7 AC233982.1-201ENST00000451247 436 ntBASIC5.13□□□□□ -1.59
USP29Q9HBJ7 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 RPS3AP41-201ENST00000462701 778 ntBASIC5.13□□□□□ -1.59
USP29Q9HBJ7 AC092324.1-201ENST00000468671 324 ntBASIC5.13□□□□□ -1.59
USP29Q9HBJ7 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 RPL5P22-201ENST00000480199 884 ntBASIC5.13□□□□□ -1.59
USP29Q9HBJ7 AC007686.1-201ENST00000488511 463 ntBASIC5.13□□□□□ -1.59
USP29Q9HBJ7 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 AC118465.1-201ENST00000513820 1271 ntBASIC5.13□□□□□ -1.59
USP29Q9HBJ7 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 AC138938.1-201ENST00000515431 782 ntBASIC5.13□□□□□ -1.59
USP29Q9HBJ7 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 AC025260.1-201ENST00000548858 430 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms