Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AL138820.1-201ENST00000617901 5305 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 RNU6-433P-201ENST00000363216 104 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 RNA5SP211-201ENST00000365516 117 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 RNU6-116P-201ENST00000384042 109 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 RNU6-532P-201ENST00000384318 107 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 RNU6-185P-201ENST00000384421 107 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 MT-TL1-201ENST00000386347 75 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 EI24P3-201ENST00000399046 1062 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 RNU2-65P-201ENST00000410162 185 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AC109780.2-201ENST00000413467 845 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 Z93242.1-201ENST00000427102 353 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 UBE2FP3-201ENST00000436366 524 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 PPIAP17-201ENST00000438507 471 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AC073614.1-201ENST00000438690 650 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 EIF5AP4-201ENST00000441206 465 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 RPS7P3-201ENST00000443360 580 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 RPL7P36-201ENST00000444633 681 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 PSPHP1-201ENST00000450062 261 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 VDAC2P4-201ENST00000452925 711 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 RN7SL269P-201ENST00000467795 305 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 LSM3P4-201ENST00000502948 309 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AF131216.2-201ENST00000512316 564 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 SNORA70.11-201ENST00000515987 138 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 SNORA70.13-201ENST00000516116 138 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 snoU109.5-201ENST00000516231 132 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 HMGB1P23-201ENST00000518743 568 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 TRIM77BP-201ENST00000524985 1119 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 OR4A45P-201ENST00000529954 901 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AC010487.1-201ENST00000594408 1172 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AL138895.2-201ENST00000603019 178 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AL365503.1-201ENST00000605247 905 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AP000648.2-201ENST00000624182 404 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AC009033.1-201ENST00000624279 431 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AC079228.1-201ENST00000624774 1049 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 MIR6863-201ENST00000636112 90 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AL360270.2-201ENST00000562952 5985 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 PARP4P2-201ENST00000446672 3326 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AC005224.3-201ENST00000584683 2140 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AL034370.1-201ENST00000397254 1590 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms