Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AC130365.2-201ENST00000525882 1201 ntBASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AC104383.1-201ENST00000530297 370 ntBASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AC068768.2-201ENST00000602352 343 ntBASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AL022394.1-201ENST00000606979 292 ntBASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AL158211.4-201ENST00000606988 584 ntBASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AC104458.1-201ENST00000608243 463 ntBASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AL353726.1-201ENST00000614041 1000 ntBASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AC009704.2-201ENST00000618739 483 ntBASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 MIR3688-2-201ENST00000636963 87 ntBASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 RNA5SP477-201ENST00000362639 119 ntBASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 Y_RNA.61-201ENST00000362835 102 ntBASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 SNORA51.1-201ENST00000363243 140 ntBASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 RNU6-619P-201ENST00000365146 108 ntBASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 RNA5SP88-201ENST00000365560 109 ntBASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 RN7SKP81-201ENST00000365603 331 ntBASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AL512422.1-201ENST00000407033 553 ntBASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 SNORA11B-201ENST00000408175 129 ntBASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AC068533.2-201ENST00000411872 306 ntBASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AC138393.2-201ENST00000414742 246 ntBASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AC092647.1-201ENST00000420654 287 ntBASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AC009237.2-201ENST00000421358 284 ntBASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AL034379.1-201ENST00000423216 253 ntBASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AC002553.3-201ENST00000453002 341 ntBASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AC092001.1-201ENST00000453012 261 ntBASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 ARPC3P2-201ENST00000457786 533 ntBASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 ACA64.1-201ENST00000459171 127 ntBASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 SNORD42A-201ENST00000459584 64 ntBASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AL672167.3-201ENST00000465951 960 ntBASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AC146507.1-201ENST00000468335 354 ntBASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AC109462.1-201ENST00000491087 368 ntBASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AC108941.1-201ENST00000502853 530 ntBASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AC106872.4-201ENST00000510050 523 ntBASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 GAPDHP62-201ENST00000515313 990 ntBASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AC006960.3-201ENST00000561845 705 ntBASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AC091834.1-201ENST00000614543 472 ntBASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 AC018816.2-201ENST00000621460 353 ntBASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXP3Q9BZS1 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms