Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 OR8L1P-201ENST00000534005 955 ntBASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 MIR6780A-201ENST00000615089 68 ntBASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 AC012414.7-202ENST00000622705 1090 ntBASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 AC067931.1-201ENST00000624190 671 ntBASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 RNF123-214ENST00000629802 207 ntTSL 5 BASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 AC132825.7-201ENST00000638744 335 ntBASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 AC125257.1-201ENST00000560400 2930 ntBASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 AC012618.3-205ENST00000637896 1496 ntBASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 DDX18P5-201ENST00000534547 1306 ntBASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 AC004987.3-201ENST00000413879 771 ntBASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 AL158825.1-201ENST00000414735 521 ntBASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 AC002542.1-201ENST00000440683 193 ntBASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 TPT1P13-201ENST00000449760 499 ntBASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 AC233982.1-201ENST00000451247 436 ntBASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 BX248409.1-201ENST00000455497 255 ntBASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 SETP6-201ENST00000479329 568 ntBASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 RFESD-208ENST00000513950 464 ntTSL 5 BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 RNA5SP392-201ENST00000516905 112 ntBASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 AP006245.2-201ENST00000522004 300 ntBASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 SOX5P1-201ENST00000524155 1127 ntBASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 AC133555.2-201ENST00000550213 292 ntBASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 AC087283.1-201ENST00000604029 1074 ntBASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 LYST-202ENST00000389794 12985 ntTSL 5 BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 AC073136.1-201ENST00000449426 2884 ntBASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC6.19□□□□□ -1.42
CHMP4AQ9BY43 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 RNA5SP502-201ENST00000362694 119 ntBASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 MIR525-201ENST00000384978 85 ntBASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 EIF5P1-201ENST00000400019 1231 ntBASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 MIR1250-201ENST00000408098 113 ntBASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 RN7SKP267-201ENST00000410381 285 ntBASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 AL590139.1-201ENST00000416267 400 ntBASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 RPL7P57-201ENST00000423238 740 ntBASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 UBE2V1P1-201ENST00000430836 445 ntBASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 RPL21P110-201ENST00000433345 446 ntBASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 AC005154.2-201ENST00000438110 379 ntBASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 AC074367.1-201ENST00000438685 1125 ntBASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 AC092170.1-201ENST00000440211 356 ntBASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 AL356981.1-201ENST00000454879 684 ntBASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 AL049839.1-201ENST00000556151 657 ntBASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 MIR5699-201ENST00000578903 90 ntBASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 AC124283.4-201ENST00000581815 456 ntBASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 AL161616.1-201ENST00000611867 286 ntBASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 RMST_10.1-201ENST00000616309 154 ntBASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CHMP4AQ9BY43 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms