Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.65□□□□□ -1.51
SALL3Q9BXA9 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SALL3Q9BXA9 AL049539.1-201ENST00000611964 459 ntBASIC5.65□□□□□ -1.51
SALL3Q9BXA9 AC068792.1-201ENST00000621354 417 ntBASIC5.65□□□□□ -1.51
SALL3Q9BXA9 AC104985.3-201ENST00000623479 597 ntBASIC5.65□□□□□ -1.51
SALL3Q9BXA9 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.65□□□□□ -1.51
SALL3Q9BXA9 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
SALL3Q9BXA9 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.65□□□□□ -1.51
SALL3Q9BXA9 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
SALL3Q9BXA9 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
SALL3Q9BXA9 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SALL3Q9BXA9 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.65□□□□□ -1.51
SALL3Q9BXA9 HSPA8P14-201ENST00000552265 1805 ntBASIC5.65□□□□□ -1.51
SALL3Q9BXA9 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.65□□□□□ -1.51
SALL3Q9BXA9 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
SALL3Q9BXA9 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
SALL3Q9BXA9 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.64□□□□□ -1.51
SALL3Q9BXA9 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.64□□□□□ -1.51
SALL3Q9BXA9 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
SALL3Q9BXA9 UGT2B26P-201ENST00000508672 1613 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 AL391684.1-202ENST00000641293 1636 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 VN2R3P-201ENST00000422626 1412 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 RBPJP2-201ENST00000618187 1444 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SALL3Q9BXA9 AL672167.2-201ENST00000377164 879 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SALL3Q9BXA9 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SALL3Q9BXA9 SNORA70F-201ENST00000384142 135 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SALL3Q9BXA9 AP002784.2-201ENST00000397300 549 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 AL356131.1-201ENST00000405826 414 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 AL139128.1-201ENST00000413921 941 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.64□□□□□ -1.51
SALL3Q9BXA9 AC012519.1-201ENST00000424588 610 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SALL3Q9BXA9 AC011753.3-201ENST00000443436 406 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.64□□□□□ -1.51
SALL3Q9BXA9 CEACAMP6-201ENST00000452007 574 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.64□□□□□ -1.51
SALL3Q9BXA9 RNA5SP103-201ENST00000459503 118 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SALL3Q9BXA9 RPL21P47-201ENST00000483696 477 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 AC026414.1-201ENST00000504046 698 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.64□□□□□ -1.51
SALL3Q9BXA9 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.64□□□□□ -1.51
SALL3Q9BXA9 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.64□□□□□ -1.51
SALL3Q9BXA9 MTCO2P15-201ENST00000532655 656 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.64□□□□□ -1.51
SALL3Q9BXA9 AP001804.2-201ENST00000533932 910 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.64□□□□□ -1.51
SALL3Q9BXA9 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.64□□□□□ -1.51
SALL3Q9BXA9 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.64□□□□□ -1.51
SALL3Q9BXA9 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.64□□□□□ -1.51
SALL3Q9BXA9 RPL7P50-201ENST00000600588 727 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 Z82195.1-201ENST00000604558 398 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 AC121247.2-201ENST00000604776 136 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 AC012213.4-201ENST00000606457 354 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 AC091979.2-201ENST00000607514 214 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 AP002360.3-201ENST00000607673 710 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 SNORD91B-202ENST00000608459 222 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 AL392048.1-201ENST00000613946 534 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.64□□□□□ -1.51
SALL3Q9BXA9 AC140113.4-201ENST00000622087 222 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 U3.53-201ENST00000628922 216 ntBASIC5.64□□□□□ -1.51
SALL3Q9BXA9 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.64□□□□□ -1.51
SALL3Q9BXA9 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SALL3Q9BXA9 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SALL3Q9BXA9 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.63□□□□□ -1.51
SALL3Q9BXA9 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
SALL3Q9BXA9 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
SALL3Q9BXA9 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SALL3Q9BXA9 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SALL3Q9BXA9 GVINP1-202ENST00000531871 7271 ntBASIC5.63□□□□□ -1.51
SALL3Q9BXA9 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SALL3Q9BXA9 Y_RNA.169-201ENST00000363745 96 ntBASIC5.63□□□□□ -1.51
SALL3Q9BXA9 Y_RNA.201-201ENST00000364052 96 ntBASIC5.63□□□□□ -1.51
SALL3Q9BXA9 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.63□□□□□ -1.51
SALL3Q9BXA9 Y_RNA.436-201ENST00000384097 102 ntBASIC5.63□□□□□ -1.51
SALL3Q9BXA9 RAB9AP4-201ENST00000415230 609 ntBASIC5.63□□□□□ -1.51
SALL3Q9BXA9 RBMY2KP-201ENST00000418221 992 ntBASIC5.63□□□□□ -1.51
SALL3Q9BXA9 MTCO1P43-201ENST00000431831 488 ntBASIC5.63□□□□□ -1.51
SALL3Q9BXA9 FTLP19-201ENST00000433300 394 ntBASIC5.63□□□□□ -1.51
SALL3Q9BXA9 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.63□□□□□ -1.51
SALL3Q9BXA9 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SALL3Q9BXA9 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.63□□□□□ -1.51
SALL3Q9BXA9 MTND2P14-201ENST00000482139 351 ntBASIC5.63□□□□□ -1.51
SALL3Q9BXA9 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.63□□□□□ -1.51
SALL3Q9BXA9 AC010374.1-201ENST00000503762 1237 ntBASIC5.63□□□□□ -1.51
SALL3Q9BXA9 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.63□□□□□ -1.51
SALL3Q9BXA9 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.63□□□□□ -1.51
SALL3Q9BXA9 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.63□□□□□ -1.51
SALL3Q9BXA9 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.63□□□□□ -1.51
SALL3Q9BXA9 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.63□□□□□ -1.51
SALL3Q9BXA9 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.63□□□□□ -1.51
SALL3Q9BXA9 MIR4480-201ENST00000582492 71 ntBASIC5.63□□□□□ -1.51
SALL3Q9BXA9 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.63□□□□□ -1.51
SALL3Q9BXA9 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.63□□□□□ -1.51
SALL3Q9BXA9 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.63□□□□□ -1.51
SALL3Q9BXA9 MTCO3P22-201ENST00000603219 784 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms