Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 MIR1250-201ENST00000408098 113 ntBASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 AC004987.3-201ENST00000413879 771 ntBASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 UBE2V1P10-201ENST00000414685 269 ntBASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 OR8F1P-201ENST00000425243 930 ntBASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 RPS3AP38-201ENST00000435889 763 ntBASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 HMGB3P21-201ENST00000452483 547 ntBASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 NDUFAF4P4-201ENST00000454883 502 ntBASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 AC023194.2-201ENST00000465398 406 ntBASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 TXNP6-201ENST00000510190 310 ntBASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 AC016065.2-201ENST00000514530 444 ntBASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 RNA5SP434-201ENST00000516647 121 ntBASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 OR5M7P-201ENST00000526140 972 ntBASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 AC024224.1-201ENST00000538284 609 ntBASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 AC090615.1-201ENST00000577519 154 ntBASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 MIR3682-201ENST00000581338 84 ntBASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 AL008723.3-201ENST00000608926 449 ntBASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.84□□□□□ -1.32
TRAIPQ9BWF2 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.84□□□□□ -1.32
TRAIPQ9BWF2 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 AL133243.2-201ENST00000610331 1621 ntBASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 SNORA21-201ENST00000362423 132 ntBASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 RN7SKP269-201ENST00000365545 319 ntBASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 REG1CP-206ENST00000447469 496 ntBASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 RPL7L1P1-201ENST00000448259 785 ntBASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 AP000542.1-201ENST00000448473 371 ntBASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 snoU13.8-201ENST00000458890 104 ntBASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 AC022034.3-201ENST00000471393 478 ntBASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 RPL9P33-201ENST00000484311 566 ntBASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 AC096751.1-202ENST00000502691 1067 ntBASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 SNORD116-26-201ENST00000516006 96 ntBASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 AP001858.2-201ENST00000536213 601 ntBASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 AC136619.2-201ENST00000563361 631 ntBASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 AC067773.1-201ENST00000603284 1094 ntBASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 YWHAQP7-201ENST00000603536 658 ntBASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 AL591167.1-201ENST00000607321 456 ntBASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 AC138749.5-201ENST00000611461 208 ntBASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 AC116165.2-201ENST00000616705 206 ntBASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 AC099654.12-201ENST00000639868 649 ntBASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRAIPQ9BWF2 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms