Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SETP12-201ENST00000514068 805 ntBASIC3.54□□□□□ -1.84
HDHD3Q9BSH5 HMGB1P46-201ENST00000520062 610 ntBASIC3.54□□□□□ -1.84
HDHD3Q9BSH5 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.54□□□□□ -1.84
HDHD3Q9BSH5 OR8K2P-201ENST00000524645 927 ntBASIC3.54□□□□□ -1.84
HDHD3Q9BSH5 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.54□□□□□ -1.84
HDHD3Q9BSH5 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3.54□□□□□ -1.84
HDHD3Q9BSH5 AC063950.1-201ENST00000552036 308 ntBASIC3.54□□□□□ -1.84
HDHD3Q9BSH5 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.54□□□□□ -1.84
HDHD3Q9BSH5 SULT1C2P2-201ENST00000562517 294 ntBASIC3.54□□□□□ -1.84
HDHD3Q9BSH5 RN7SL753P-201ENST00000581238 290 ntBASIC3.54□□□□□ -1.84
HDHD3Q9BSH5 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.54□□□□□ -1.84
HDHD3Q9BSH5 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.54□□□□□ -1.84
HDHD3Q9BSH5 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.54□□□□□ -1.84
HDHD3Q9BSH5 OR4H6P-202ENST00000603819 340 ntBASIC3.54□□□□□ -1.84
HDHD3Q9BSH5 AC113403.1-201ENST00000604910 193 ntBASIC3.54□□□□□ -1.84
HDHD3Q9BSH5 AC025175.1-201ENST00000606482 759 ntBASIC3.54□□□□□ -1.84
HDHD3Q9BSH5 AC023813.4-201ENST00000607580 580 ntBASIC3.54□□□□□ -1.84
HDHD3Q9BSH5 AP000894.4-201ENST00000610185 483 ntBASIC3.54□□□□□ -1.84
HDHD3Q9BSH5 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HDHD3Q9BSH5 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HDHD3Q9BSH5 AC006971.1-201ENST00000407916 4486 ntBASIC3.54□□□□□ -1.84
HDHD3Q9BSH5 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HDHD3Q9BSH5 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
HDHD3Q9BSH5 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.54□□□□□ -1.84
HDHD3Q9BSH5 AC093535.2-201ENST00000624769 2326 ntBASIC3.54□□□□□ -1.84
HDHD3Q9BSH5 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 MFSD8-242ENST00000641690 4199 ntBASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 AC097504.1-201ENST00000515103 2415 ntBASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 MIR105-2-201ENST00000385083 81 ntBASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 AL034374.1-201ENST00000406329 351 ntBASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 MIR1179-201ENST00000408703 91 ntBASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 RNA5SP36-201ENST00000410197 133 ntBASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 AC069213.2-201ENST00000420238 366 ntBASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 AC022022.1-201ENST00000430304 178 ntBASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 LYPLA1P1-201ENST00000434514 622 ntBASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 MTND2P2-201ENST00000434633 945 ntBASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 RPL10P17-201ENST00000453852 316 ntBASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 RPS26P15-201ENST00000488067 348 ntBASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 BNIP3P41-201ENST00000503774 571 ntBASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 AC108120.2-201ENST00000512973 294 ntBASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 RNU6-1308P-201ENST00000516817 103 ntBASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 OR8G5-201ENST00000524943 1041 ntBASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 AC007599.1-201ENST00000568688 1174 ntBASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 MIR4480-201ENST00000582492 71 ntBASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 OR1AB1P-201ENST00000585564 761 ntBASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 AC135178.6-201ENST00000605314 398 ntBASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 AL162574.2-201ENST00000614618 657 ntBASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 uc_338.13-201ENST00000618243 179 ntBASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 MIR7702-201ENST00000621931 59 ntBASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 AC015908.5-201ENST00000623289 343 ntBASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 AC090017.1-201ENST00000548612 1779 ntBASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
HDHD3Q9BSH5 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.85
HDHD3Q9BSH5 DHX40P1-201ENST00000588725 1412 ntBASIC3.53□□□□□ -1.85
HDHD3Q9BSH5 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HDHD3Q9BSH5 AC025031.4-201ENST00000621248 3271 ntBASIC3.52□□□□□ -1.85
HDHD3Q9BSH5 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.52□□□□□ -1.85
HDHD3Q9BSH5 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HDHD3Q9BSH5 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HDHD3Q9BSH5 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms