Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC6.53□□□□□ -1.36
IFT140Q96RY7 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
IFT140Q96RY7 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC6.53□□□□□ -1.36
IFT140Q96RY7 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
IFT140Q96RY7 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
IFT140Q96RY7 AC005326.1-201ENST00000429197 123 ntBASIC6.53□□□□□ -1.36
IFT140Q96RY7 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC6.53□□□□□ -1.36
IFT140Q96RY7 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
IFT140Q96RY7 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC6.53□□□□□ -1.36
IFT140Q96RY7 AL591363.1-201ENST00000450091 483 ntBASIC6.53□□□□□ -1.36
IFT140Q96RY7 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC6.53□□□□□ -1.36
IFT140Q96RY7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC6.53□□□□□ -1.36
IFT140Q96RY7 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC6.53□□□□□ -1.36
IFT140Q96RY7 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC6.53□□□□□ -1.36
IFT140Q96RY7 RPL23AP87-202ENST00000573039 466 ntBASIC6.53□□□□□ -1.36
IFT140Q96RY7 MIR8058-201ENST00000615737 89 ntBASIC6.53□□□□□ -1.36
IFT140Q96RY7 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
IFT140Q96RY7 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
IFT140Q96RY7 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.36
IFT140Q96RY7 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC6.52□□□□□ -1.37
IFT140Q96RY7 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
IFT140Q96RY7 AC093591.2-201ENST00000565254 3843 ntBASIC6.52□□□□□ -1.37
IFT140Q96RY7 ESD-201ENST00000378697 1079 ntTSL 5 BASIC6.52□□□□□ -1.37
IFT140Q96RY7 RPS26P4-201ENST00000431743 355 ntBASIC6.52□□□□□ -1.37
IFT140Q96RY7 AC012158.1-204ENST00000483430 465 ntBASIC6.52□□□□□ -1.37
IFT140Q96RY7 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.52□□□□□ -1.37
IFT140Q96RY7 AC012493.2-201ENST00000595083 291 ntBASIC6.52□□□□□ -1.37
IFT140Q96RY7 AL451044.1-201ENST00000604867 238 ntBASIC6.52□□□□□ -1.37
IFT140Q96RY7 AC140113.4-201ENST00000622087 222 ntBASIC6.52□□□□□ -1.37
IFT140Q96RY7 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
IFT140Q96RY7 NCOA4P2-201ENST00000340589 1813 ntBASIC6.52□□□□□ -1.37
IFT140Q96RY7 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.52□□□□□ -1.37
IFT140Q96RY7 SPATA31D2P-201ENST00000429999 4388 ntBASIC6.51□□□□□ -1.37
IFT140Q96RY7 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
IFT140Q96RY7 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
IFT140Q96RY7 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
IFT140Q96RY7 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
IFT140Q96RY7 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
IFT140Q96RY7 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
IFT140Q96RY7 SNORD35B-201ENST00000363660 87 ntBASIC6.51□□□□□ -1.37
IFT140Q96RY7 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.51□□□□□ -1.37
IFT140Q96RY7 AL390879.2-203ENST00000426943 1121 ntBASIC6.51□□□□□ -1.37
IFT140Q96RY7 RPS27AP15-201ENST00000447672 466 ntBASIC6.51□□□□□ -1.37
IFT140Q96RY7 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC6.51□□□□□ -1.37
IFT140Q96RY7 AC068993.1-201ENST00000546724 589 ntBASIC6.51□□□□□ -1.37
IFT140Q96RY7 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.51□□□□□ -1.37
IFT140Q96RY7 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC6.51□□□□□ -1.37
IFT140Q96RY7 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
IFT140Q96RY7 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
IFT140Q96RY7 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
IFT140Q96RY7 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC6.51□□□□□ -1.37
IFT140Q96RY7 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
IFT140Q96RY7 GVINP1-202ENST00000531871 7271 ntBASIC6.5□□□□□ -1.37
IFT140Q96RY7 MTCO1P46-201ENST00000451639 1491 ntBASIC6.5□□□□□ -1.37
IFT140Q96RY7 APOOP2-201ENST00000461561 539 ntBASIC6.5□□□□□ -1.37
IFT140Q96RY7 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC6.5□□□□□ -1.37
IFT140Q96RY7 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC6.5□□□□□ -1.37
IFT140Q96RY7 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.5□□□□□ -1.37
IFT140Q96RY7 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.5□□□□□ -1.37
IFT140Q96RY7 AC022968.1-201ENST00000567372 442 ntBASIC6.5□□□□□ -1.37
IFT140Q96RY7 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC6.5□□□□□ -1.37
IFT140Q96RY7 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC6.5□□□□□ -1.37
IFT140Q96RY7 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC6.5□□□□□ -1.37
IFT140Q96RY7 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
IFT140Q96RY7 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.5□□□□□ -1.37
IFT140Q96RY7 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
IFT140Q96RY7 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
IFT140Q96RY7 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.49□□□□□ -1.37
IFT140Q96RY7 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
IFT140Q96RY7 OR6K3-202ENST00000368146 996 ntBASIC6.49□□□□□ -1.37
IFT140Q96RY7 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC6.49□□□□□ -1.37
IFT140Q96RY7 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC6.49□□□□□ -1.37
IFT140Q96RY7 AC108022.1-201ENST00000493466 478 ntBASIC6.49□□□□□ -1.37
IFT140Q96RY7 PHBP17-201ENST00000528576 541 ntBASIC6.49□□□□□ -1.37
IFT140Q96RY7 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
IFT140Q96RY7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
IFT140Q96RY7 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
IFT140Q96RY7 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
IFT140Q96RY7 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC6.48□□□□□ -1.37
IFT140Q96RY7 Y_RNA.510-201ENST00000384511 114 ntBASIC6.48□□□□□ -1.37
IFT140Q96RY7 VDAC1P9-201ENST00000412766 841 ntBASIC6.48□□□□□ -1.37
IFT140Q96RY7 EIF4A1P1-201ENST00000420241 934 ntBASIC6.48□□□□□ -1.37
IFT140Q96RY7 HIGD1AP4-201ENST00000430194 280 ntBASIC6.48□□□□□ -1.37
IFT140Q96RY7 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC6.48□□□□□ -1.37
IFT140Q96RY7 RPS26P2-201ENST00000440331 348 ntBASIC6.48□□□□□ -1.37
IFT140Q96RY7 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.48□□□□□ -1.37
IFT140Q96RY7 DCLRE1CP1-201ENST00000454630 470 ntBASIC6.48□□□□□ -1.37
IFT140Q96RY7 RPL37P3-201ENST00000456825 293 ntBASIC6.48□□□□□ -1.37
IFT140Q96RY7 AC108751.2-201ENST00000469993 231 ntBASIC6.48□□□□□ -1.37
IFT140Q96RY7 RN7SL809P-201ENST00000482040 297 ntBASIC6.48□□□□□ -1.37
IFT140Q96RY7 RPL32P34-201ENST00000486380 400 ntBASIC6.48□□□□□ -1.37
IFT140Q96RY7 AP000563.1-201ENST00000490865 758 ntBASIC6.48□□□□□ -1.37
IFT140Q96RY7 AC026784.1-201ENST00000507986 352 ntBASIC6.48□□□□□ -1.37
IFT140Q96RY7 SNORA70.17-201ENST00000516449 133 ntBASIC6.48□□□□□ -1.37
IFT140Q96RY7 AC012417.1-201ENST00000582307 1039 ntBASIC6.48□□□□□ -1.37
IFT140Q96RY7 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC6.48□□□□□ -1.37
IFT140Q96RY7 YPEL5P2-201ENST00000605553 359 ntBASIC6.48□□□□□ -1.37
IFT140Q96RY7 AL355365.1-201ENST00000616480 294 ntBASIC6.48□□□□□ -1.37
IFT140Q96RY7 AC090246.1-201ENST00000616499 426 ntBASIC6.48□□□□□ -1.37
IFT140Q96RY7 MIR8069-1-201ENST00000616627 86 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms