Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AC019050.1-201ENST00000418508 492 ntBASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AC009238.2-201ENST00000431026 355 ntBASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 CNOT7P2-201ENST00000441051 832 ntBASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AL034418.1-201ENST00000448675 860 ntBASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 RPS4XP1-201ENST00000482189 787 ntBASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 RN7SL30P-201ENST00000488416 306 ntBASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AC092045.1-201ENST00000495716 1231 ntBASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AC008885.2-201ENST00000509506 930 ntBASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AC010285.3-201ENST00000511668 676 ntBASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 RNU6-678P-201ENST00000516832 109 ntBASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 IGKV2-36-201ENST00000519999 223 ntBASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 EIF4A2P5-201ENST00000529914 499 ntBASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 GTF2IP8-201ENST00000560687 584 ntBASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AC022884.2-201ENST00000578535 580 ntBASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AC095055.1-201ENST00000603472 1113 ntBASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AC009163.6-201ENST00000612367 342 ntBASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AC004223.4-201ENST00000612426 332 ntBASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AC090116.1-201ENST00000615679 446 ntBASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AC091932.2-201ENST00000623014 291 ntBASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AC007494.3-201ENST00000624660 743 ntBASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 PANDAR-201ENST00000629595 1506 ntBASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 OR9K1P-202ENST00000641111 3217 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 U3.7-201ENST00000363668 216 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 RNU6-619P-201ENST00000365146 108 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 RNU6-1300P-201ENST00000391046 108 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 RPL12P9-201ENST00000412942 488 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 P2RY10P2-201ENST00000416730 913 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 TIMM9P2-201ENST00000419324 266 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AC007559.1-201ENST00000428736 355 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 MTND1P20-201ENST00000430341 950 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AL627308.1-201ENST00000435693 821 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 RPL5P25-201ENST00000441148 775 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 GTF3AP5-201ENST00000442645 697 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 YWHAQP9-201ENST00000445891 512 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 PRPF38AP1-201ENST00000451976 933 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 RN7SL172P-201ENST00000460535 303 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AC108161.1-201ENST00000461060 402 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 DSTNP2-201ENST00000504533 515 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AC006499.3-201ENST00000506077 748 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 GTF2F2P1-201ENST00000511083 675 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 RN7SKP283-201ENST00000517197 270 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 IGLV2-28-201ENST00000520681 304 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AC024940.3-201ENST00000538551 316 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.86□□□□□ -1.63
CTHRC1Q96CG8 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms