Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS33AQ96AX1 AC068339.2-201ENST00000534395 618 ntBASIC4.56□□□□□ -1.68
VPS33AQ96AX1 SERPINE4P-201ENST00000554978 281 ntBASIC4.56□□□□□ -1.68
VPS33AQ96AX1 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS33AQ96AX1 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS33AQ96AX1 AC091488.1-201ENST00000604239 660 ntBASIC4.56□□□□□ -1.68
VPS33AQ96AX1 AL121932.1-201ENST00000605542 214 ntBASIC4.56□□□□□ -1.68
VPS33AQ96AX1 AC008115.4-201ENST00000619780 775 ntBASIC4.56□□□□□ -1.68
VPS33AQ96AX1 AL353662.3-201ENST00000625131 237 ntBASIC4.56□□□□□ -1.68
VPS33AQ96AX1 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS33AQ96AX1 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS33AQ96AX1 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
VPS33AQ96AX1 AC090229.1-201ENST00000590983 1609 ntBASIC4.56□□□□□ -1.68
VPS33AQ96AX1 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VPS33AQ96AX1 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS33AQ96AX1 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS33AQ96AX1 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.56□□□□□ -1.68
VPS33AQ96AX1 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS33AQ96AX1 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 AC007390.2-201ENST00000606229 3803 ntBASIC4.55□□□□□ -1.68
VPS33AQ96AX1 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 AL136520.1-201ENST00000600311 1322 ntBASIC4.55□□□□□ -1.68
VPS33AQ96AX1 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 THAP12P4-201ENST00000528321 2266 ntBASIC4.55□□□□□ -1.68
VPS33AQ96AX1 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 RNU6-984P-201ENST00000363236 109 ntBASIC4.55□□□□□ -1.68
VPS33AQ96AX1 SNORA70-201ENST00000384436 135 ntBASIC4.55□□□□□ -1.68
VPS33AQ96AX1 RNA5SP372-201ENST00000390836 115 ntBASIC4.55□□□□□ -1.68
VPS33AQ96AX1 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.55□□□□□ -1.68
VPS33AQ96AX1 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.55□□□□□ -1.68
VPS33AQ96AX1 UBE2V1P9-201ENST00000414760 368 ntBASIC4.55□□□□□ -1.68
VPS33AQ96AX1 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 GTF3AP1-201ENST00000416942 1004 ntBASIC4.55□□□□□ -1.68
VPS33AQ96AX1 OR2AM1P-201ENST00000422137 422 ntBASIC4.55□□□□□ -1.68
VPS33AQ96AX1 AC002069.1-201ENST00000429649 1159 ntBASIC4.55□□□□□ -1.68
VPS33AQ96AX1 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 AL391987.1-201ENST00000441025 200 ntBASIC4.55□□□□□ -1.68
VPS33AQ96AX1 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 AC104651.2-201ENST00000447549 528 ntBASIC4.55□□□□□ -1.68
VPS33AQ96AX1 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 Z95152.1-201ENST00000453556 656 ntBASIC4.55□□□□□ -1.68
VPS33AQ96AX1 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 CDC42P1-201ENST00000456658 548 ntBASIC4.55□□□□□ -1.68
VPS33AQ96AX1 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 RPS18P6-201ENST00000476880 458 ntBASIC4.55□□□□□ -1.68
VPS33AQ96AX1 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 AC010374.1-201ENST00000503762 1237 ntBASIC4.55□□□□□ -1.68
VPS33AQ96AX1 AC090071.1-201ENST00000507713 644 ntBASIC4.55□□□□□ -1.68
VPS33AQ96AX1 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 IGKV3D-34-201ENST00000522638 302 ntBASIC4.55□□□□□ -1.68
VPS33AQ96AX1 IGJP1-201ENST00000522682 475 ntBASIC4.55□□□□□ -1.68
VPS33AQ96AX1 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 AC011447.4-201ENST00000587562 111 ntBASIC4.55□□□□□ -1.68
VPS33AQ96AX1 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 MEMO1P5-201ENST00000604810 406 ntBASIC4.55□□□□□ -1.68
VPS33AQ96AX1 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 AC015813.6-201ENST00000624409 5808 ntBASIC4.55□□□□□ -1.68
VPS33AQ96AX1 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.55□□□□□ -1.68
VPS33AQ96AX1 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 EOGT-210ENST00000615922 1931 ntBASIC4.54□□□□□ -1.68
VPS33AQ96AX1 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 PABPC1P6-201ENST00000445594 1829 ntBASIC4.54□□□□□ -1.68
VPS33AQ96AX1 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 LAP3P1-201ENST00000403648 294 ntBASIC4.54□□□□□ -1.68
VPS33AQ96AX1 MIR1286-201ENST00000408112 78 ntBASIC4.54□□□□□ -1.68
VPS33AQ96AX1 GTF2IP5-201ENST00000414608 731 ntBASIC4.54□□□□□ -1.68
VPS33AQ96AX1 AC007394.1-201ENST00000421941 531 ntBASIC4.54□□□□□ -1.68
VPS33AQ96AX1 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 AC246680.2-201ENST00000422106 389 ntBASIC4.54□□□□□ -1.68
VPS33AQ96AX1 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS33AQ96AX1 NPM1P34-201ENST00000428821 893 ntBASIC4.54□□□□□ -1.68
VPS33AQ96AX1 MRPL50P1-201ENST00000431951 384 ntBASIC4.54□□□□□ -1.68
VPS33AQ96AX1 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms