Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.6□□□□□ -1.51
HPS3Q969F9 NECAP1P2-201ENST00000455668 727 ntBASIC5.6□□□□□ -1.51
HPS3Q969F9 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.6□□□□□ -1.51
HPS3Q969F9 RPL7AP10-201ENST00000481016 791 ntBASIC5.6□□□□□ -1.51
HPS3Q969F9 RN7SL727P-201ENST00000482164 296 ntBASIC5.6□□□□□ -1.51
HPS3Q969F9 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HPS3Q969F9 OR5M14P-201ENST00000506803 618 ntBASIC5.6□□□□□ -1.51
HPS3Q969F9 AC093755.1-201ENST00000512950 1023 ntBASIC5.6□□□□□ -1.51
HPS3Q969F9 TCP11X3P-202ENST00000514289 1254 ntBASIC5.6□□□□□ -1.51
HPS3Q969F9 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.6□□□□□ -1.51
HPS3Q969F9 C1GALT1P3-201ENST00000522049 819 ntBASIC5.6□□□□□ -1.51
HPS3Q969F9 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.6□□□□□ -1.51
HPS3Q969F9 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.6□□□□□ -1.51
HPS3Q969F9 NBEAP1-201ENST00000554452 979 ntBASIC5.6□□□□□ -1.51
HPS3Q969F9 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.6□□□□□ -1.51
HPS3Q969F9 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.6□□□□□ -1.51
HPS3Q969F9 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.6□□□□□ -1.51
HPS3Q969F9 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.6□□□□□ -1.51
HPS3Q969F9 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.6□□□□□ -1.51
HPS3Q969F9 AC105254.2-201ENST00000603636 436 ntBASIC5.6□□□□□ -1.51
HPS3Q969F9 AL139344.1-201ENST00000605228 195 ntBASIC5.6□□□□□ -1.51
HPS3Q969F9 AC243654.2-201ENST00000612843 443 ntBASIC5.6□□□□□ -1.51
HPS3Q969F9 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.6□□□□□ -1.51
HPS3Q969F9 AP001005.3-201ENST00000622049 129 ntBASIC5.6□□□□□ -1.51
HPS3Q969F9 AC017037.3-201ENST00000625016 472 ntBASIC5.6□□□□□ -1.51
HPS3Q969F9 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
HPS3Q969F9 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HPS3Q969F9 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HPS3Q969F9 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HPS3Q969F9 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
HPS3Q969F9 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.6□□□□□ -1.51
HPS3Q969F9 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.59□□□□□ -1.51
HPS3Q969F9 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
HPS3Q969F9 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
HPS3Q969F9 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HPS3Q969F9 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.59□□□□□ -1.51
HPS3Q969F9 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
HPS3Q969F9 AC011447.7-201ENST00000624228 1590 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HPS3Q969F9 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HPS3Q969F9 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
HPS3Q969F9 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.59□□□□□ -1.51
HPS3Q969F9 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.59□□□□□ -1.51
HPS3Q969F9 AL022322.2-201ENST00000624072 20397 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 SNURFL-201ENST00000309296 343 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 AC017079.1-201ENST00000333650 415 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 SNORA70.10-201ENST00000384515 134 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 RNU6-83P-201ENST00000384568 112 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 SFR1P1-201ENST00000403720 688 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 U3.36-201ENST00000408418 213 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.59□□□□□ -1.51
HPS3Q969F9 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.59□□□□□ -1.51
HPS3Q969F9 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.59□□□□□ -1.51
HPS3Q969F9 AC007435.1-201ENST00000421086 415 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 GTF2IP23-201ENST00000423746 351 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.59□□□□□ -1.51
HPS3Q969F9 COX6CP13-201ENST00000428703 226 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.59□□□□□ -1.51
HPS3Q969F9 PPIAP17-201ENST00000438507 471 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 USP9YP22-201ENST00000438971 294 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 AL450023.3-201ENST00000440592 271 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.59□□□□□ -1.51
HPS3Q969F9 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.59□□□□□ -1.51
HPS3Q969F9 SETD6P1-201ENST00000444575 317 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.59□□□□□ -1.51
HPS3Q969F9 AC079776.3-201ENST00000450665 370 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HPS3Q969F9 IGHV5-78-201ENST00000450948 295 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 ANKRD26P4-201ENST00000455755 950 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.59□□□□□ -1.51
HPS3Q969F9 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.59□□□□□ -1.51
HPS3Q969F9 VPS26AP1-201ENST00000483197 979 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 DYNLL1P6-201ENST00000503440 264 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.59□□□□□ -1.51
HPS3Q969F9 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.59□□□□□ -1.51
HPS3Q969F9 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.59□□□□□ -1.51
HPS3Q969F9 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.59□□□□□ -1.51
HPS3Q969F9 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.59□□□□□ -1.51
HPS3Q969F9 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.59□□□□□ -1.51
HPS3Q969F9 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.59□□□□□ -1.51
HPS3Q969F9 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.59□□□□□ -1.51
HPS3Q969F9 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.59□□□□□ -1.51
HPS3Q969F9 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.59□□□□□ -1.51
HPS3Q969F9 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.59□□□□□ -1.51
HPS3Q969F9 AC069545.1-201ENST00000605671 358 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.59□□□□□ -1.51
HPS3Q969F9 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.59□□□□□ -1.51
HPS3Q969F9 AP000255.1-201ENST00000610276 676 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 AL136295.6-201ENST00000610486 658 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 AC105227.2-201ENST00000615075 605 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 AC016769.4-201ENST00000616893 535 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.59□□□□□ -1.51
HPS3Q969F9 AC116563.2-201ENST00000624751 535 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.59□□□□□ -1.51
HPS3Q969F9 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.59□□□□□ -1.51
HPS3Q969F9 AC073869.10-201ENST00000642016 354 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 C4BPAP1-201ENST00000415474 1893 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms