Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNED1Q8TER0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.04□□□□□ -1.6
SNED1Q8TER0 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SNED1Q8TER0 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.04□□□□□ -1.6
SNED1Q8TER0 SNORA5A-201ENST00000384111 134 ntBASIC5.04□□□□□ -1.6
SNED1Q8TER0 U3.23-201ENST00000391132 200 ntBASIC5.04□□□□□ -1.6
SNED1Q8TER0 SNORD66.1-201ENST00000391230 76 ntBASIC5.04□□□□□ -1.6
SNED1Q8TER0 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.04□□□□□ -1.6
SNED1Q8TER0 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.04□□□□□ -1.6
SNED1Q8TER0 RPS11P1-201ENST00000451072 473 ntBASIC5.04□□□□□ -1.6
SNED1Q8TER0 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC5.04□□□□□ -1.6
SNED1Q8TER0 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.04□□□□□ -1.6
SNED1Q8TER0 RPS29P19-201ENST00000479709 171 ntBASIC5.04□□□□□ -1.6
SNED1Q8TER0 AC118282.1-201ENST00000506408 765 ntBASIC5.04□□□□□ -1.6
SNED1Q8TER0 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.04□□□□□ -1.6
SNED1Q8TER0 MIR3200-201ENST00000580767 85 ntBASIC5.04□□□□□ -1.6
SNED1Q8TER0 AC090330.1-201ENST00000588646 764 ntBASIC5.04□□□□□ -1.6
SNED1Q8TER0 AC012314.7-201ENST00000619693 93 ntBASIC5.04□□□□□ -1.6
SNED1Q8TER0 AL357559.1-201ENST00000622228 274 ntBASIC5.04□□□□□ -1.6
SNED1Q8TER0 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNED1Q8TER0 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.04□□□□□ -1.6
SNED1Q8TER0 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SNED1Q8TER0 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
SNED1Q8TER0 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.04□□□□□ -1.6
SNED1Q8TER0 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNED1Q8TER0 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.03□□□□□ -1.6
SNED1Q8TER0 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNED1Q8TER0 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNED1Q8TER0 MTND5P23-201ENST00000430812 1655 ntBASIC5.03□□□□□ -1.6
SNED1Q8TER0 ZNF285B-201ENST00000561698 1767 ntBASIC5.03□□□□□ -1.6
SNED1Q8TER0 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNED1Q8TER0 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNED1Q8TER0 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNED1Q8TER0 OR5T3-201ENST00000303059 1023 ntBASIC5.03□□□□□ -1.6
SNED1Q8TER0 RN7SKP186-201ENST00000365371 303 ntBASIC5.03□□□□□ -1.6
SNED1Q8TER0 RNU6-167P-201ENST00000384292 106 ntBASIC5.03□□□□□ -1.6
SNED1Q8TER0 MIR200C-201ENST00000384980 68 ntBASIC5.03□□□□□ -1.6
SNED1Q8TER0 PEX12P1-201ENST00000400284 1048 ntBASIC5.03□□□□□ -1.6
SNED1Q8TER0 AL078604.1-201ENST00000404609 466 ntBASIC5.03□□□□□ -1.6
SNED1Q8TER0 SNORA11.2-201ENST00000408318 127 ntBASIC5.03□□□□□ -1.6
SNED1Q8TER0 MIR1179-201ENST00000408703 91 ntBASIC5.03□□□□□ -1.6
SNED1Q8TER0 AC068533.1-201ENST00000418542 415 ntBASIC5.03□□□□□ -1.6
SNED1Q8TER0 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.03□□□□□ -1.6
SNED1Q8TER0 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.03□□□□□ -1.6
SNED1Q8TER0 AP000907.1-201ENST00000428428 510 ntBASIC5.03□□□□□ -1.6
SNED1Q8TER0 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.03□□□□□ -1.6
SNED1Q8TER0 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.03□□□□□ -1.6
SNED1Q8TER0 TPT1P1-201ENST00000458495 518 ntBASIC5.03□□□□□ -1.6
SNED1Q8TER0 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.03□□□□□ -1.6
SNED1Q8TER0 AC110792.1-201ENST00000491826 472 ntBASIC5.03□□□□□ -1.6
SNED1Q8TER0 DEFB109F-201ENST00000491870 277 ntBASIC5.03□□□□□ -1.6
SNED1Q8TER0 KRT19P6-201ENST00000510983 209 ntBASIC5.03□□□□□ -1.6
SNED1Q8TER0 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.03□□□□□ -1.6
SNED1Q8TER0 RFPL4AP3-201ENST00000515267 345 ntBASIC5.03□□□□□ -1.6
SNED1Q8TER0 SNORA74D-201ENST00000516404 141 ntBASIC5.03□□□□□ -1.6
SNED1Q8TER0 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.03□□□□□ -1.6
SNED1Q8TER0 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNED1Q8TER0 AP000619.3-201ENST00000535634 1127 ntBASIC5.03□□□□□ -1.6
SNED1Q8TER0 MTND1P8-201ENST00000571424 950 ntBASIC5.03□□□□□ -1.6
SNED1Q8TER0 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.03□□□□□ -1.6
SNED1Q8TER0 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.03□□□□□ -1.6
SNED1Q8TER0 CLIC4P2-201ENST00000601934 717 ntBASIC5.03□□□□□ -1.6
SNED1Q8TER0 AC009948.4-201ENST00000604692 675 ntBASIC5.03□□□□□ -1.6
SNED1Q8TER0 MIR6868-201ENST00000611215 58 ntBASIC5.03□□□□□ -1.6
SNED1Q8TER0 AC003001.2-201ENST00000616294 831 ntBASIC5.03□□□□□ -1.6
SNED1Q8TER0 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.03□□□□□ -1.6
SNED1Q8TER0 AC006927.4-201ENST00000639187 543 ntBASIC5.03□□□□□ -1.6
SNED1Q8TER0 PCAT14-202ENST00000627127 3935 ntBASIC5.03□□□□□ -1.6
SNED1Q8TER0 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNED1Q8TER0 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNED1Q8TER0 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
SNED1Q8TER0 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNED1Q8TER0 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNED1Q8TER0 OR4A15-201ENST00000314706 1035 ntBASIC5.02□□□□□ -1.61
SNED1Q8TER0 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.02□□□□□ -1.61
SNED1Q8TER0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNED1Q8TER0 AL450992.3-201ENST00000413192 568 ntBASIC5.02□□□□□ -1.61
SNED1Q8TER0 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.02□□□□□ -1.61
SNED1Q8TER0 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.02□□□□□ -1.61
SNED1Q8TER0 MTATP6P17-201ENST00000431030 672 ntBASIC5.02□□□□□ -1.61
SNED1Q8TER0 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.02□□□□□ -1.61
SNED1Q8TER0 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNED1Q8TER0 RPL7P15-201ENST00000461190 712 ntBASIC5.02□□□□□ -1.61
SNED1Q8TER0 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.02□□□□□ -1.61
SNED1Q8TER0 TRBV8-1-201ENST00000481590 279 ntBASIC5.02□□□□□ -1.61
SNED1Q8TER0 HPRT1P2-201ENST00000505250 544 ntBASIC5.02□□□□□ -1.61
SNED1Q8TER0 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.02□□□□□ -1.61
SNED1Q8TER0 AC110768.1-201ENST00000509222 400 ntBASIC5.02□□□□□ -1.61
SNED1Q8TER0 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.02□□□□□ -1.61
SNED1Q8TER0 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SNED1Q8TER0 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.02□□□□□ -1.61
SNED1Q8TER0 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.02□□□□□ -1.61
SNED1Q8TER0 MIR3936-201ENST00000584304 110 ntBASIC5.02□□□□□ -1.61
SNED1Q8TER0 AC110743.1-201ENST00000584870 478 ntBASIC5.02□□□□□ -1.61
SNED1Q8TER0 AC097505.1-201ENST00000610199 565 ntBASIC5.02□□□□□ -1.61
SNED1Q8TER0 EOGT-210ENST00000615922 1931 ntBASIC5.02□□□□□ -1.61
SNED1Q8TER0 AC015967.1-201ENST00000619893 476 ntBASIC5.02□□□□□ -1.61
SNED1Q8TER0 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SNED1Q8TER0 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
SNED1Q8TER0 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms