Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 MFSD13B-201ENST00000420133 1290 ntBASIC1.27□□□□□ -2.21
SYNE1Q8NF91 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 HMGN2P31-201ENST00000432430 273 ntBASIC1.27□□□□□ -2.21
SYNE1Q8NF91 BTF3P10-201ENST00000433415 495 ntBASIC1.27□□□□□ -2.21
SYNE1Q8NF91 GOT2P5-201ENST00000433995 546 ntBASIC1.27□□□□□ -2.21
SYNE1Q8NF91 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 RNA5SP497-201ENST00000516081 97 ntBASIC1.27□□□□□ -2.21
SYNE1Q8NF91 AGGF1P6-201ENST00000569213 976 ntBASIC1.27□□□□□ -2.21
SYNE1Q8NF91 AC053481.4-201ENST00000583164 216 ntBASIC1.27□□□□□ -2.21
SYNE1Q8NF91 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 CEP170P1-201ENST00000502249 4587 ntBASIC1.27□□□□□ -2.21
SYNE1Q8NF91 Z95331.1-201ENST00000623075 23112 ntBASIC1.27□□□□□ -2.21
SYNE1Q8NF91 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 MIR449B-201ENST00000384995 97 ntBASIC1.27□□□□□ -2.21
SYNE1Q8NF91 NACAP7-201ENST00000407371 609 ntBASIC1.27□□□□□ -2.21
SYNE1Q8NF91 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 AP003730.1-201ENST00000524605 285 ntBASIC1.27□□□□□ -2.21
SYNE1Q8NF91 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 SETP1-201ENST00000556014 845 ntBASIC1.27□□□□□ -2.21
SYNE1Q8NF91 AC015908.5-201ENST00000623289 343 ntBASIC1.27□□□□□ -2.21
SYNE1Q8NF91 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 AL121950.1-201ENST00000624993 2077 ntBASIC1.27□□□□□ -2.21
SYNE1Q8NF91 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 AL161631.1-201ENST00000417933 486 ntBASIC1.27□□□□□ -2.21
SYNE1Q8NF91 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 AL162151.2-201ENST00000448875 158 ntBASIC1.27□□□□□ -2.21
SYNE1Q8NF91 EEF1A1P25-201ENST00000495704 1267 ntBASIC1.27□□□□□ -2.21
SYNE1Q8NF91 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 RNA5SP49-201ENST00000516450 115 ntBASIC1.27□□□□□ -2.21
SYNE1Q8NF91 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 AC140113.4-201ENST00000622087 222 ntBASIC1.27□□□□□ -2.21
SYNE1Q8NF91 AL356863.1-201ENST00000623378 1080 ntBASIC1.27□□□□□ -2.21
SYNE1Q8NF91 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 AC139769.1-204ENST00000472297 1931 ntBASIC1.27□□□□□ -2.21
SYNE1Q8NF91 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 MIR554-201ENST00000384874 96 ntBASIC1.27□□□□□ -2.21
SYNE1Q8NF91 AC018644.1-201ENST00000429934 551 ntBASIC1.27□□□□□ -2.21
SYNE1Q8NF91 SERPINA7P1-201ENST00000443077 631 ntBASIC1.27□□□□□ -2.21
SYNE1Q8NF91 AC234782.5-201ENST00000617723 324 ntBASIC1.27□□□□□ -2.21
SYNE1Q8NF91 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SYNE1Q8NF91 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 RNU1-94P-201ENST00000362627 173 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 SNORA71B-202ENST00000439232 272 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 HMGB3P9-201ENST00000441799 583 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 VN1R34P-201ENST00000447387 883 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 GAPDHP36-201ENST00000480688 918 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AP005264.7-201ENST00000625003 745 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 ERCC6-202ENST00000374127 1782 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC007066.1-201ENST00000392902 381 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AL590704.1-201ENST00000402856 794 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC004448.2-201ENST00000422360 586 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC104333.2-201ENST00000422630 192 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 RPL21P91-201ENST00000429231 479 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 EIF4A2P2-201ENST00000455776 1070 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 TPT1P1-201ENST00000458495 518 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 CREM-238ENST00000488741 651 ntTSL 2 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 HMGB3P16-201ENST00000508037 287 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 RN7SKP46-201ENST00000515942 234 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC026403.1-201ENST00000518938 295 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC027309.2-201ENST00000520566 192 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC087499.8-201ENST00000578406 226 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC244505.7-201ENST00000599675 272 ntBASIC1.26□□□□□ -2.21
SYNE1Q8NF91 AC025175.1-201ENST00000606482 759 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms