Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 RPL32P3-201ENST00000359025 275 ntBASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 SNORA66-201ENST00000384792 133 ntBASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 OR4K6P-201ENST00000416478 897 ntBASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 P2RY10P2-201ENST00000416730 913 ntBASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 REREP1Y-201ENST00000422655 198 ntBASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 AC009480.2-201ENST00000422916 432 ntBASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 REREP2Y-201ENST00000439103 200 ntBASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 AL606662.1-201ENST00000445763 553 ntBASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 BMI1P1-201ENST00000445879 941 ntBASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 AC135999.1-201ENST00000478962 479 ntBASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 RN7SL319P-201ENST00000480656 221 ntBASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 OR5H4P-201ENST00000510851 923 ntBASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 RNA5SP43-201ENST00000516559 110 ntBASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 IGKV1-32-201ENST00000519290 311 ntBASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 MTCO3P15-201ENST00000526563 574 ntBASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 ELOCP32-201ENST00000548625 324 ntBASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 MIR3915-201ENST00000578518 97 ntBASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 SS18L2P2-201ENST00000583960 235 ntBASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 RSL24D1P11-201ENST00000591045 491 ntBASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 DUXAP11-201ENST00000603858 526 ntBASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 uc_338.7-201ENST00000621834 124 ntBASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 RPL23AP61-201ENST00000623642 466 ntBASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 AC005618.4-201ENST00000625053 554 ntBASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 LINC01808-202ENST00000641680 1116 ntBASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A3Q8N4M1 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 FAM3C2-201ENST00000312214 681 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AL356968.2-201ENST00000412769 1257 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 OR6C64P-201ENST00000419708 825 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AC007559.1-201ENST00000428736 355 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 IFNNP1-201ENST00000429219 553 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AC099670.2-201ENST00000435130 321 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AL137845.2-201ENST00000444292 988 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 LINC02210-201ENST00000444561 288 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 MTCYBP3-201ENST00000445588 1137 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AC007327.1-201ENST00000447461 264 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 RPS23P7-201ENST00000466210 444 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AC006967.1-201ENST00000467608 589 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AC107398.1-201ENST00000486904 505 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AC138409.2-202ENST00000507274 458 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AC113347.3-201ENST00000509113 148 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms