Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 KCTD10P1-201ENST00000434203 625 ntBASIC5.28□□□□□ -1.56
HERC6Q8IVU3 PPIAP13-201ENST00000434706 478 ntBASIC5.28□□□□□ -1.56
HERC6Q8IVU3 NPM1P33-201ENST00000438918 872 ntBASIC5.28□□□□□ -1.56
HERC6Q8IVU3 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.28□□□□□ -1.56
HERC6Q8IVU3 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 AC016559.2-201ENST00000510759 359 ntBASIC5.28□□□□□ -1.56
HERC6Q8IVU3 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 PRELID3BP4-201ENST00000515476 571 ntBASIC5.28□□□□□ -1.56
HERC6Q8IVU3 RNU2-30P-201ENST00000516209 141 ntBASIC5.28□□□□□ -1.56
HERC6Q8IVU3 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 COX6B1P6-201ENST00000522347 255 ntBASIC5.28□□□□□ -1.56
HERC6Q8IVU3 AC104417.1-201ENST00000523974 751 ntBASIC5.28□□□□□ -1.56
HERC6Q8IVU3 AC027369.5-201ENST00000533838 755 ntBASIC5.28□□□□□ -1.56
HERC6Q8IVU3 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 AC090751.1-201ENST00000566966 267 ntBASIC5.28□□□□□ -1.56
HERC6Q8IVU3 AC023575.1-201ENST00000580510 358 ntBASIC5.28□□□□□ -1.56
HERC6Q8IVU3 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 AC091057.3-201ENST00000602684 733 ntBASIC5.28□□□□□ -1.56
HERC6Q8IVU3 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 AC017104.5-201ENST00000637647 639 ntBASIC5.28□□□□□ -1.56
HERC6Q8IVU3 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 MTCO1P6-201ENST00000481192 1384 ntBASIC5.28□□□□□ -1.56
HERC6Q8IVU3 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 Z95331.1-201ENST00000623075 23112 ntBASIC5.27□□□□□ -1.57
HERC6Q8IVU3 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.27□□□□□ -1.57
HERC6Q8IVU3 THAP12P5-201ENST00000405864 2275 ntBASIC5.27□□□□□ -1.57
HERC6Q8IVU3 AC104260.2-201ENST00000623551 3497 ntBASIC5.27□□□□□ -1.57
HERC6Q8IVU3 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HERC6Q8IVU3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HERC6Q8IVU3 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HERC6Q8IVU3 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
HERC6Q8IVU3 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
HERC6Q8IVU3 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
HERC6Q8IVU3 SNORA57.1-201ENST00000391227 145 ntBASIC5.27□□□□□ -1.57
HERC6Q8IVU3 EI24P3-201ENST00000399046 1062 ntBASIC5.27□□□□□ -1.57
HERC6Q8IVU3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HERC6Q8IVU3 ZNF602P-201ENST00000405929 924 ntBASIC5.27□□□□□ -1.57
HERC6Q8IVU3 PCNPP4-201ENST00000414817 517 ntBASIC5.27□□□□□ -1.57
HERC6Q8IVU3 TBCAP2-201ENST00000416175 326 ntBASIC5.27□□□□□ -1.57
HERC6Q8IVU3 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.27□□□□□ -1.57
HERC6Q8IVU3 AC073069.1-201ENST00000428657 441 ntBASIC5.27□□□□□ -1.57
HERC6Q8IVU3 AC114973.1-201ENST00000429057 632 ntBASIC5.27□□□□□ -1.57
HERC6Q8IVU3 YWHAEP5-201ENST00000431545 765 ntBASIC5.27□□□□□ -1.57
HERC6Q8IVU3 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
HERC6Q8IVU3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.27□□□□□ -1.57
HERC6Q8IVU3 MRPL35P2-201ENST00000448009 511 ntBASIC5.27□□□□□ -1.57
HERC6Q8IVU3 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HERC6Q8IVU3 RPL37P3-201ENST00000456825 293 ntBASIC5.27□□□□□ -1.57
HERC6Q8IVU3 RPS4XP12-201ENST00000461747 709 ntBASIC5.27□□□□□ -1.57
HERC6Q8IVU3 AC104164.3-201ENST00000467363 1258 ntBASIC5.27□□□□□ -1.57
HERC6Q8IVU3 RPL23AP71-201ENST00000470966 469 ntBASIC5.27□□□□□ -1.57
HERC6Q8IVU3 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HERC6Q8IVU3 TRAV31-201ENST00000502780 342 ntBASIC5.27□□□□□ -1.57
HERC6Q8IVU3 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
HERC6Q8IVU3 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.27□□□□□ -1.57
HERC6Q8IVU3 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HERC6Q8IVU3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.27□□□□□ -1.57
HERC6Q8IVU3 AC040958.1-201ENST00000561102 201 ntBASIC5.27□□□□□ -1.57
HERC6Q8IVU3 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.27□□□□□ -1.57
HERC6Q8IVU3 MTCYBP13-201ENST00000578634 1093 ntBASIC5.27□□□□□ -1.57
HERC6Q8IVU3 AC123786.2-201ENST00000603459 275 ntBASIC5.27□□□□□ -1.57
HERC6Q8IVU3 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.27□□□□□ -1.57
HERC6Q8IVU3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.27□□□□□ -1.57
HERC6Q8IVU3 AC243654.2-201ENST00000612843 443 ntBASIC5.27□□□□□ -1.57
HERC6Q8IVU3 BNIP3P41-202ENST00000616656 861 ntBASIC5.27□□□□□ -1.57
HERC6Q8IVU3 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HERC6Q8IVU3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
HERC6Q8IVU3 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.27□□□□□ -1.57
HERC6Q8IVU3 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.27□□□□□ -1.57
HERC6Q8IVU3 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HERC6Q8IVU3 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HERC6Q8IVU3 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HERC6Q8IVU3 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HERC6Q8IVU3 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HERC6Q8IVU3 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HERC6Q8IVU3 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.26□□□□□ -1.57
HERC6Q8IVU3 RN7SKP74-201ENST00000362849 309 ntBASIC5.26□□□□□ -1.57
HERC6Q8IVU3 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
HERC6Q8IVU3 RNA5SP397-201ENST00000391323 118 ntBASIC5.26□□□□□ -1.57
HERC6Q8IVU3 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC5.26□□□□□ -1.57
HERC6Q8IVU3 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.26□□□□□ -1.57
HERC6Q8IVU3 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.26□□□□□ -1.57
HERC6Q8IVU3 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.26□□□□□ -1.57
HERC6Q8IVU3 ELOCP10-201ENST00000440624 327 ntBASIC5.26□□□□□ -1.57
HERC6Q8IVU3 RPS7P5-201ENST00000441482 581 ntBASIC5.26□□□□□ -1.57
HERC6Q8IVU3 AC004980.3-201ENST00000447046 365 ntBASIC5.26□□□□□ -1.57
HERC6Q8IVU3 MTND2P8-201ENST00000450555 1025 ntBASIC5.26□□□□□ -1.57
HERC6Q8IVU3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.26□□□□□ -1.57
HERC6Q8IVU3 AC245028.2-201ENST00000458673 253 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms