Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 SPATA2P1-201ENST00000431223 2055 ntBASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 MIR421-201ENST00000365696 85 ntBASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 RNU6-225P-201ENST00000384613 103 ntBASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 GSTA12P-201ENST00000402398 508 ntBASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 MIR1179-201ENST00000408703 91 ntBASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 PSMD10P3-201ENST00000437000 448 ntBASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 EEF1A1P1-201ENST00000447052 739 ntBASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 RNU6-775P-201ENST00000459318 96 ntBASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 RPL12P20-201ENST00000475538 479 ntBASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 AC010627.1-201ENST00000503819 1294 ntBASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 AC021146.7-201ENST00000509604 775 ntBASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 SNORD116-26-201ENST00000516006 96 ntBASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 IGKV2-38-201ENST00000517443 247 ntBASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 AC021483.2-201ENST00000567415 758 ntBASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 AC068020.1-201ENST00000594215 661 ntBASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 AC025946.2-201ENST00000603398 234 ntBASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 AC073111.2-201ENST00000605657 1075 ntBASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 AC025175.1-201ENST00000606482 759 ntBASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 AL121873.1-201ENST00000616013 524 ntBASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 AC004825.2-201ENST00000616634 455 ntBASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 AP005019.3-201ENST00000620418 560 ntBASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 AC010300.1-201ENST00000600671 5134 ntBASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 AC134882.1-201ENST00000603738 1676 ntBASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 AP001486.2-201ENST00000561652 5113 ntBASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 OR11H5P-202ENST00000641612 1325 ntBASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
NUDCD3Q8IVD9 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 RNA5SP502-201ENST00000362694 119 ntBASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 RNU6-304P-201ENST00000364855 107 ntBASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 RN7SKP222-201ENST00000410651 315 ntBASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 AL450992.3-201ENST00000413192 568 ntBASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 RNF19BPX-201ENST00000426224 625 ntBASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 AL353898.1-201ENST00000444055 238 ntBASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 MORF4L1P4-201ENST00000450245 976 ntBASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 CEACAMP6-201ENST00000452007 574 ntBASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 HMGB3P21-201ENST00000452483 547 ntBASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 RPL23AP81-201ENST00000455252 467 ntBASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 RNU6-1218P-201ENST00000458990 108 ntBASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 RN7SL329P-201ENST00000467740 299 ntBASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 AC010374.1-201ENST00000503762 1237 ntBASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 NDUFB5P1-201ENST00000508134 564 ntBASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 RNU6-491P-201ENST00000516099 110 ntBASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 RNU6-751P-201ENST00000516382 101 ntBASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 MIR3934-201ENST00000579806 107 ntBASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 AC008536.1-201ENST00000602872 669 ntBASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 AC100847.1-201ENST00000611316 481 ntBASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 AC078899.5-201ENST00000612475 178 ntBASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 AC026368.1-201ENST00000614934 690 ntBASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NUDCD3Q8IVD9 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 SNORD113.2-201ENST00000364166 89 ntBASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 BTF3P9-201ENST00000418784 283 ntBASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 UQCRBP1-201ENST00000421129 336 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms