Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC074029.4-201ENST00000624796 1859 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC71Q8IV32 AC012020.1-201ENST00000624541 1728 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 AC018529.3-201ENST00000624212 2254 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC71Q8IV32 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC71Q8IV32 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC71Q8IV32 RNA5SP52-201ENST00000362448 134 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 RNA5SP447-201ENST00000363749 119 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CCDC71Q8IV32 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.24□□□□□ -1.73
CCDC71Q8IV32 SNORA11-201ENST00000408789 128 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 AL121882.1-201ENST00000422893 417 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 OR6K4P-201ENST00000423179 955 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 RPEP3-201ENST00000425462 676 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 SKP1P3-201ENST00000429280 487 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC71Q8IV32 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC71Q8IV32 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 RPS27AP15-201ENST00000447672 466 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 AL121877.1-201ENST00000453704 622 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC71Q8IV32 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 AC108022.1-201ENST00000493466 478 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 PPM1AP1-201ENST00000502740 1135 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 HAUS1P1-201ENST00000505275 832 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC71Q8IV32 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC71Q8IV32 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.24□□□□□ -1.73
CCDC71Q8IV32 VWA8P1-201ENST00000510889 176 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 RNU6-1102P-201ENST00000516149 96 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC71Q8IV32 AC004923.2-201ENST00000529649 369 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC71Q8IV32 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.24□□□□□ -1.73
CCDC71Q8IV32 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC71Q8IV32 AL110118.1-201ENST00000553543 400 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 AC124068.1-201ENST00000563131 678 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 AC079148.1-201ENST00000565944 819 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC71Q8IV32 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC71Q8IV32 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC71Q8IV32 AC098483.2-201ENST00000603158 454 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC71Q8IV32 AL158211.2-201ENST00000607282 395 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 AP002360.3-201ENST00000607673 710 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 AC245389.2-201ENST00000616023 576 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 AC006338.2-201ENST00000616864 791 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 AC242843.1-201ENST00000618702 573 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 AC020978.9-201ENST00000624380 1141 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 MIR6830-201ENST00000636015 70 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC71Q8IV32 MTND4P26-201ENST00000415971 1359 ntBASIC4.24□□□□□ -1.73
CCDC71Q8IV32 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
CCDC71Q8IV32 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC71Q8IV32 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC71Q8IV32 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC71Q8IV32 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC71Q8IV32 AC010300.1-201ENST00000600671 5134 ntBASIC4.23□□□□□ -1.73
CCDC71Q8IV32 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
CCDC71Q8IV32 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CCDC71Q8IV32 RNU6-609P-201ENST00000365459 107 ntBASIC4.23□□□□□ -1.73
CCDC71Q8IV32 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC71Q8IV32 RNU6-178P-201ENST00000384631 104 ntBASIC4.23□□□□□ -1.73
CCDC71Q8IV32 TAF9BP2-201ENST00000400856 499 ntBASIC4.23□□□□□ -1.73
CCDC71Q8IV32 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.23□□□□□ -1.73
CCDC71Q8IV32 CHIAP3-201ENST00000423668 1133 ntBASIC4.23□□□□□ -1.73
CCDC71Q8IV32 AL732292.1-201ENST00000426692 226 ntBASIC4.23□□□□□ -1.73
CCDC71Q8IV32 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC71Q8IV32 RPL7P33-201ENST00000444159 742 ntBASIC4.23□□□□□ -1.73
CCDC71Q8IV32 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC71Q8IV32 RPL10P17-201ENST00000453852 316 ntBASIC4.23□□□□□ -1.73
CCDC71Q8IV32 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.23□□□□□ -1.73
CCDC71Q8IV32 AC078857.1-201ENST00000469870 667 ntBASIC4.23□□□□□ -1.73
CCDC71Q8IV32 RPS26P28-201ENST00000470806 348 ntBASIC4.23□□□□□ -1.73
CCDC71Q8IV32 NPM1P17-201ENST00000479221 602 ntBASIC4.23□□□□□ -1.73
CCDC71Q8IV32 AC083829.1-201ENST00000503756 657 ntBASIC4.23□□□□□ -1.73
CCDC71Q8IV32 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC71Q8IV32 AC008694.2-201ENST00000517591 306 ntBASIC4.23□□□□□ -1.73
CCDC71Q8IV32 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.23□□□□□ -1.73
CCDC71Q8IV32 VTA1P2-201ENST00000520205 911 ntBASIC4.23□□□□□ -1.73
CCDC71Q8IV32 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.23□□□□□ -1.73
CCDC71Q8IV32 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC71Q8IV32 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC71Q8IV32 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC71Q8IV32 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC71Q8IV32 TOMM20P2-201ENST00000540082 421 ntBASIC4.23□□□□□ -1.73
CCDC71Q8IV32 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC71Q8IV32 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.23□□□□□ -1.73
CCDC71Q8IV32 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC71Q8IV32 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC71Q8IV32 AL121834.1-201ENST00000572284 509 ntBASIC4.23□□□□□ -1.73
CCDC71Q8IV32 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC71Q8IV32 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC71Q8IV32 AC073091.2-201ENST00000603205 907 ntBASIC4.23□□□□□ -1.73
CCDC71Q8IV32 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC71Q8IV32 AL590392.1-201ENST00000604960 446 ntBASIC4.23□□□□□ -1.73
CCDC71Q8IV32 AC010201.1-201ENST00000605051 540 ntBASIC4.23□□□□□ -1.73
CCDC71Q8IV32 MLECP1-201ENST00000615893 709 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms