Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 NTAN1P1-201ENST00000603150 646 ntBASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 AP003117.2-201ENST00000606010 545 ntBASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 AC105429.2-201ENST00000610567 517 ntBASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 FRG1HP-204ENST00000617940 757 ntBASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 AC018529.3-201ENST00000624212 2254 ntBASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AL132640.2-201ENST00000559968 1698 ntBASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AC025031.4-201ENST00000621248 3271 ntBASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 THAP12P5-201ENST00000405864 2275 ntBASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 MIR124-3-201ENST00000384866 87 ntBASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 MIR550A3-201ENST00000390735 95 ntBASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 MIR1303-201ENST00000408625 86 ntBASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AC092162.1-201ENST00000432828 434 ntBASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AC073052.1-201ENST00000440417 714 ntBASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 RPS7P5-201ENST00000441482 581 ntBASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 ARL5AP2-201ENST00000444698 533 ntBASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AC020890.1-201ENST00000491837 504 ntBASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 BTF3P13-201ENST00000513224 490 ntBASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AC010306.1-201ENST00000523223 1117 ntBASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AC021006.3-201ENST00000530771 192 ntBASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 BGLT3-201ENST00000564523 994 ntBASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 MIR3934-201ENST00000579806 107 ntBASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 MIR4472-2-201ENST00000582069 67 ntBASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 MIR3936-201ENST00000584304 110 ntBASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AC233280.2-201ENST00000603917 1070 ntBASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AC073569.3-201ENST00000619055 682 ntBASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AC007275.1-201ENST00000621243 671 ntBASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AC083899.2-201ENST00000423285 1376 ntBASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AL022393.1-201ENST00000625142 1677 ntBASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 AC139713.2-215ENST00000641428 5037 ntBASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
NUP54Q7Z3B4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 OR11H5P-202ENST00000641612 1325 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 RNA5SP27-201ENST00000363839 119 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AL133270.1-201ENST00000402635 279 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AP000580.1-201ENST00000404439 358 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 RNA5SP239-201ENST00000410218 129 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 RNA5SP345-201ENST00000410646 108 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AC013410.2-201ENST00000422627 201 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms