Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC025263.3-201ENST00000622965 1396 ntBASIC4.89□□□□□ -1.63
PTCHD4Q6ZW05 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTCHD4Q6ZW05 AC114786.1-201ENST00000512892 1415 ntBASIC4.89□□□□□ -1.63
PTCHD4Q6ZW05 AP000542.2-201ENST00000623199 6179 ntBASIC4.89□□□□□ -1.63
PTCHD4Q6ZW05 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AC100778.3-201ENST00000580060 1750 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AC005539.1-201ENST00000443768 1479 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 Z99496.1-201ENST00000469424 1477 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 PHKBP1-201ENST00000450951 1951 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 RN7SKP153-201ENST00000365026 316 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 OR52E6-202ENST00000379946 954 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 RNU6-317P-201ENST00000384031 107 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 SNORD116-4-201ENST00000384733 96 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AL590290.1-201ENST00000405336 380 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 OR51A3P-201ENST00000413596 924 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AL161449.1-201ENST00000414531 1199 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 P2RY10P2-201ENST00000416730 913 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 MTCO2P16-201ENST00000436962 677 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 RPS7P5-201ENST00000441482 581 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 HMGB3P9-201ENST00000441799 583 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 ATP5C1P1-201ENST00000441945 895 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AC009961.3-201ENST00000449832 765 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 RPL5P24-201ENST00000463742 885 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AC092754.1-201ENST00000472975 479 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AC080014.1-201ENST00000496877 1201 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AP003033.1-201ENST00000527244 415 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AC005363.1-201ENST00000530779 351 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 TOMM20P1-201ENST00000534518 427 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 NANOGNBP2-201ENST00000544753 553 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AC068714.1-201ENST00000559623 800 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AC018552.3-201ENST00000567416 561 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 ISCA1P3-201ENST00000577104 373 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 MIR3915-201ENST00000578518 97 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AC103987.3-201ENST00000582071 292 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AC090312.2-201ENST00000582687 378 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AC009220.3-201ENST00000604318 586 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AL499605.1-201ENST00000604628 403 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AC090948.2-201ENST00000607363 564 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AC009163.6-201ENST00000612367 342 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AC004223.4-201ENST00000612426 332 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AL607023.1-201ENST00000620045 248 ntBASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PTCHD4Q6ZW05 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 AC087359.1-201ENST00000508335 1740 ntBASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD4Q6ZW05 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms