Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC7.72□□□□□ -1.17
VARS2Q5ST30 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC7.72□□□□□ -1.17
VARS2Q5ST30 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
VARS2Q5ST30 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.72□□□□□ -1.17
VARS2Q5ST30 AC010886.1-201ENST00000437380 2869 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 AC005034.3-201ENST00000604845 1747 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC7.72□□□□□ -1.17
VARS2Q5ST30 AC009948.5-201ENST00000624360 4406 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
VARS2Q5ST30 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
VARS2Q5ST30 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
VARS2Q5ST30 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
VARS2Q5ST30 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC7.72□□□□□ -1.17
VARS2Q5ST30 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
VARS2Q5ST30 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.72□□□□□ -1.17
VARS2Q5ST30 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC7.71□□□□□ -1.17
VARS2Q5ST30 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC7.71□□□□□ -1.17
VARS2Q5ST30 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
VARS2Q5ST30 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
VARS2Q5ST30 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.17
VARS2Q5ST30 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
VARS2Q5ST30 CASC19-284ENST00000642142 1868 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
VARS2Q5ST30 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
VARS2Q5ST30 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.18
VARS2Q5ST30 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.71□□□□□ -1.18
VARS2Q5ST30 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
VARS2Q5ST30 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
VARS2Q5ST30 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
VARS2Q5ST30 HSPE1P11-201ENST00000339579 310 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 Y_RNA.2-201ENST00000362330 96 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 RNU6-1255P-201ENST00000363434 112 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 Y_RNA.199-201ENST00000364014 102 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 SNORA62.1-201ENST00000364287 154 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 RN7SKP171-201ENST00000364417 303 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 RNU6-1317P-201ENST00000364582 104 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 Y_RNA.277-201ENST00000364754 102 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 Y_RNA.314-201ENST00000365114 102 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 Y_RNA.418-201ENST00000384029 102 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 RNU6-1029P-201ENST00000384109 107 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 RNU1-149P-201ENST00000390870 161 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 RNU6-244P-201ENST00000391028 104 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 RNU6-952P-201ENST00000391164 108 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
VARS2Q5ST30 RPL21P38-201ENST00000418090 167 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 HCG25-217ENST00000422366 702 ntTSL 3 BASIC7.71□□□□□ -1.18
VARS2Q5ST30 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC7.71□□□□□ -1.18
VARS2Q5ST30 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC7.71□□□□□ -1.18
VARS2Q5ST30 AC064862.5-201ENST00000440618 334 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 RPL7L1P11-201ENST00000446092 721 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 AC004980.3-201ENST00000447046 365 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 AL162388.1-201ENST00000450912 352 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 NDUFB4P10-201ENST00000452541 359 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC7.71□□□□□ -1.18
VARS2Q5ST30 AC117395.2-201ENST00000463122 1128 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 RPL21P104-201ENST00000464143 478 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 TRBV8-2-201ENST00000475637 270 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC7.71□□□□□ -1.18
VARS2Q5ST30 AP001803.1-201ENST00000525668 147 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC7.71□□□□□ -1.18
VARS2Q5ST30 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC7.71□□□□□ -1.18
VARS2Q5ST30 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC7.71□□□□□ -1.18
VARS2Q5ST30 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.71□□□□□ -1.18
VARS2Q5ST30 AL031846.1-201ENST00000560933 314 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.71□□□□□ -1.18
VARS2Q5ST30 NDUFB9P1-201ENST00000604683 510 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 AC123768.4-201ENST00000616244 701 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 AL450472.1-202ENST00000637286 180 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 AL034408.1-201ENST00000637712 664 ntBASIC7.71□□□□□ -1.18
VARS2Q5ST30 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC7.71□□□□□ -1.18
VARS2Q5ST30 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
VARS2Q5ST30 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
VARS2Q5ST30 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
VARS2Q5ST30 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
VARS2Q5ST30 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
VARS2Q5ST30 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.7□□□□□ -1.18
VARS2Q5ST30 AC011379.1-201ENST00000508713 3025 ntBASIC7.7□□□□□ -1.18
VARS2Q5ST30 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
VARS2Q5ST30 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
VARS2Q5ST30 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
VARS2Q5ST30 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
VARS2Q5ST30 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.7□□□□□ -1.18
VARS2Q5ST30 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
VARS2Q5ST30 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
VARS2Q5ST30 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
VARS2Q5ST30 THUMPD3P1-201ENST00000506556 1480 ntBASIC7.7□□□□□ -1.18
VARS2Q5ST30 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.7□□□□□ -1.18
VARS2Q5ST30 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
VARS2Q5ST30 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.7□□□□□ -1.18
VARS2Q5ST30 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC7.7□□□□□ -1.18
VARS2Q5ST30 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
VARS2Q5ST30 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
VARS2Q5ST30 AL391987.6-201ENST00000305671 199 ntBASIC7.7□□□□□ -1.18
VARS2Q5ST30 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
VARS2Q5ST30 RNY3P11-201ENST00000364153 102 ntBASIC7.7□□□□□ -1.18
VARS2Q5ST30 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
VARS2Q5ST30 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC7.7□□□□□ -1.18
VARS2Q5ST30 MIR191-201ENST00000384873 92 ntBASIC7.7□□□□□ -1.18
VARS2Q5ST30 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms