Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 SMG1P7-201ENST00000565246 2704 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 IRF5P1-201ENST00000504852 2164 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 NACA3P-201ENST00000359690 648 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 snoZ40.1-201ENST00000364540 72 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 OR1L1-202ENST00000373686 1083 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 RNU6-225P-201ENST00000384613 103 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 NUDT19P3-201ENST00000404698 555 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 AC048351.1-201ENST00000420064 602 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 RPF2P1-201ENST00000424137 906 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 RPL21P43-201ENST00000425440 472 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 AC011753.3-201ENST00000443436 406 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 IGBP1P3-201ENST00000447449 1000 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 AL672167.3-201ENST00000465951 960 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 RN7SL459P-201ENST00000481078 302 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 BET1P1-201ENST00000482276 359 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 AC058823.1-201ENST00000485315 474 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 HMGN2P25-201ENST00000486956 268 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 AL035404.1-201ENST00000497982 568 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 RFPL4AP5-201ENST00000514977 504 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 AC012400.1-201ENST00000518452 381 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 AL356057.1-201ENST00000533798 831 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 AC234771.5-201ENST00000600161 514 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 AC008745.1-201ENST00000604064 271 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 AL161616.1-201ENST00000611867 286 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 AC109454.4-201ENST00000623411 649 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 AC073869.8-201ENST00000641806 335 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 MTND4P31-201ENST00000425607 1343 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 ZNF652P1-201ENST00000442420 1309 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 Z95331.1-201ENST00000623075 23112 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 MTCO1P6-201ENST00000481192 1384 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 AC092747.4-201ENST00000620519 1861 ntBASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AC009962.1-201ENST00000567327 3813 ntBASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AC006206.1-201ENST00000544842 3387 ntBASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 RNU6-249P-201ENST00000363016 102 ntBASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 RNU1-32P-201ENST00000363937 159 ntBASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 RNU6-413P-201ENST00000384115 107 ntBASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 SNORD116-1-201ENST00000384335 95 ntBASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 RNU6-83P-201ENST00000384568 112 ntBASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 FCF1P5-201ENST00000406490 482 ntBASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 CHEK2P3-201ENST00000416118 248 ntBASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 MTND2P18-201ENST00000419962 1030 ntBASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 OR5AW1P-201ENST00000426334 1006 ntBASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 PRPF38AP2-201ENST00000438179 851 ntBASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms