Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC38Q502W7 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC38Q502W7 AC011493.1-201ENST00000596753 1632 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC38Q502W7 CASC19-206ENST00000641028 1430 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC38Q502W7 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CCDC38Q502W7 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CCDC38Q502W7 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
CCDC38Q502W7 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.21□□□□□ -1.57
CCDC38Q502W7 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC38Q502W7 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC38Q502W7 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC38Q502W7 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CCDC38Q502W7 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CCDC38Q502W7 RNU1-94P-201ENST00000362627 173 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 U3.2-201ENST00000362981 210 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 RN7SKP160-201ENST00000363804 340 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 TMSB4XP8-201ENST00000402089 135 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 GSTA8P-201ENST00000404253 637 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 AL136310.1-201ENST00000404926 654 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 RPS3AP25-201ENST00000411660 793 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 PRELID3BP11-201ENST00000414230 479 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 TMSB4XP6-201ENST00000415187 135 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 AC004690.1-201ENST00000418216 328 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 RPS3AP37-201ENST00000419176 745 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 TMSB4XP1-201ENST00000424567 135 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC38Q502W7 CEACAMP1-201ENST00000434624 1035 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC38Q502W7 VN1R25P-201ENST00000443385 738 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 SPRYD7P1-201ENST00000443861 570 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CCDC38Q502W7 PTMAP3-201ENST00000447474 330 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 RPS27AP15-201ENST00000447672 466 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 AL589880.1-201ENST00000448271 287 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC38Q502W7 RPS4XP14-201ENST00000493072 781 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC38Q502W7 RN7SKP96-201ENST00000516948 297 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC38Q502W7 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.21□□□□□ -1.58
CCDC38Q502W7 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC38Q502W7 SERPINE4P-201ENST00000554978 281 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC38Q502W7 AC013244.3-201ENST00000605614 388 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 AC009974.1-201ENST00000608881 455 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 AC009237.17-201ENST00000618111 748 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 AP001002.2-201ENST00000625137 386 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC38Q502W7 AC135068.12-201ENST00000637370 931 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 MFSD8-245ENST00000641743 948 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.21□□□□□ -1.58
CCDC38Q502W7 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC38Q502W7 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC38Q502W7 PANDAR-201ENST00000629595 1506 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC38Q502W7 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CCDC38Q502W7 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC38Q502W7 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC38Q502W7 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC38Q502W7 AC099786.3-201ENST00000565735 1410 ntBASIC5.21□□□□□ -1.58
CCDC38Q502W7 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC38Q502W7 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC38Q502W7 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.2□□□□□ -1.58
CCDC38Q502W7 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CCDC38Q502W7 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
CCDC38Q502W7 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC38Q502W7 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
CCDC38Q502W7 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC38Q502W7 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CCDC38Q502W7 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CCDC38Q502W7 RNU4-68P-201ENST00000364314 141 ntBASIC5.2□□□□□ -1.58
CCDC38Q502W7 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
CCDC38Q502W7 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC38Q502W7 Y_RNA.472-201ENST00000384322 102 ntBASIC5.2□□□□□ -1.58
CCDC38Q502W7 MIR143-201ENST00000385300 106 ntBASIC5.2□□□□□ -1.58
CCDC38Q502W7 PRRC2CP1-201ENST00000404428 159 ntBASIC5.2□□□□□ -1.58
CCDC38Q502W7 RNU4-22P-201ENST00000411058 166 ntBASIC5.2□□□□□ -1.58
CCDC38Q502W7 OR51B3P-201ENST00000412287 913 ntBASIC5.2□□□□□ -1.58
CCDC38Q502W7 NPM1P4-201ENST00000414095 812 ntBASIC5.2□□□□□ -1.58
CCDC38Q502W7 AL592310.1-201ENST00000414330 671 ntBASIC5.2□□□□□ -1.58
CCDC38Q502W7 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC38Q502W7 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC38Q502W7 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC38Q502W7 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.2□□□□□ -1.58
CCDC38Q502W7 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC38Q502W7 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC38Q502W7 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC38Q502W7 AC245047.2-201ENST00000441060 530 ntBASIC5.2□□□□□ -1.58
CCDC38Q502W7 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC38Q502W7 AC004980.3-201ENST00000447046 365 ntBASIC5.2□□□□□ -1.58
CCDC38Q502W7 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC38Q502W7 OFD1P3Y-201ENST00000453312 783 ntBASIC5.2□□□□□ -1.58
CCDC38Q502W7 PTGES3P5-201ENST00000455109 434 ntBASIC5.2□□□□□ -1.58
CCDC38Q502W7 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC38Q502W7 Z92846.1-201ENST00000456203 268 ntBASIC5.2□□□□□ -1.58
CCDC38Q502W7 AC004815.1-201ENST00000484185 331 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms